RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	TMEM206	Q9H813	350 aa		20.78	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	CIZ1	Q9ULV3	898 aa	Predicted RBP	20.78	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	MMP17	Q9ULZ9	603 aa		20.78	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	WNT6	Q9Y6F9	365 aa		20.78	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	PRPF40A	O75400	957 aa	Known RBP	20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	SEC13	P55735	322 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	BYSL	Q13895	437 aa	Known RBP	20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	SPDYC	Q5MJ68	293 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	SLC23A3	Q6PIS1	610 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	CCDC33	Q8N5R6	958 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	OLIG1	Q8TAK6	271 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	COL26A1	Q96A83	441 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	CYP2S1	Q96SQ9	504 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	PYM1	Q9BRP8	204 aa	Known RBP	20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	TRPC7	Q9HCX4	862 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	LARS	Q9P2J5	1176 aa	Known RBP	20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	NOL7	Q9UMY1	257 aa	Known RBP	20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	DERA	Q9Y315	318 aa		20.77	■□□□□ 0.92
CDK5RAP2-218	ENST00000491334	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	TRAV19	A0A0A6YYK7	116 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334		K7EQS6	105 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	P2RY2	P41231	377 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	MRPS21	P82921	87 aa	Known RBP	20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	GNL2	Q13823	731 aa	Known RBP	20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	HNRNPD	Q14103	355 aa	Known RBP	20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	TMEM132D	Q14C87	1099 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	ZNF77	Q15935	545 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	NFE2	Q16621	373 aa	Predicted RBP	20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	WSCD1	Q658N2	575 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	EFCAB13	Q8IY85	973 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	TMEFF1	Q8IYR6	380 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CHCHD4	Q8N4Q1	142 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	TMEM74B	Q9NUR3	256 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	GPSM3	Q9Y4H4	160 aa		20.76	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	FLNB	O75369	2602 aa	Known RBP	20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CKM	P06732	381 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CDC25A	P30304	524 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	TAF6	P49848	677 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	RPL10A	P62906	217 aa	Known RBP	20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	TSPY1	Q01534	308 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	ZNF423	Q2M1K9	1284 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	SOWAHC	Q53LP3	525 aa	Predicted RBP	20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	C19orf48	Q6RUI8	117 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	KCNK18	Q7Z418	384 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	KCTD17	Q8N5Z5	321 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CEP76	Q8TAP6	659 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	WHAMM	Q8TF30	809 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	RLN3	Q8WXF3	142 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	C8orf76	Q96K31	380 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	PI4K2A	Q9BTU6	479 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	LINC00597	Q9H2U6	94 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	KCND2	Q9NZV8	630 aa		20.75	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	PI4KA	P42356	2102 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	HNRNPDL	O14979	420 aa	Known RBP	20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	FAM189A1	O60320	539 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	SEC24B	O95487	1268 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	NFATC1	O95644	943 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CAPNS1	P04632	268 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CFI	P05156	583 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	SCP2	P22307	547 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	HOXD12	P35452	270 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	PTGER3	P43115	390 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	ANAPC15	P60006	121 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	GFPT1	Q06210	699 aa	Predicted RBP	20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	LYSMD4	Q5XG99	296 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	ARMCX6	Q7L4S7	300 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	PDZD3	Q86UT5	571 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	SYT2	Q8N9I0	419 aa	Predicted RBP	20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	FSIP1	Q8NA03	581 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	TRMT2B	Q96GJ1	504 aa	Known RBP	20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	MYRFL	Q96LU7	910 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	FNBP1	Q96RU3	617 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	MSTO1	Q9BUK6	570 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CCSER1	Q9C0I3	900 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	ASB7	Q9H672	318 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	POLM	Q9NP87	494 aa	Predicted RBP	20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	CPSF3	Q9UKF6	684 aa	Known RBP	20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	SLC6A14	Q9UN76	642 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	FREM2	Q5SZK8	3169 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	IGSF10	Q6WRI0	2623 aa		20.74	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	DENND4C	Q5VZ89	1909 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334		A0A0B4J269	797 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	PP2D1	A8MPX8	630 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	OPHN1	O60890	802 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	NFIC	P08651	508 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	OPRD1	P41143	372 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	GPR15	P49685	360 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	NCKAP1L	P55160	1127 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	USP4	Q13107	963 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	ZRSR1	Q15695	479 aa	Known RBP	20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	DDR2	Q16832	855 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	DUOXA1	Q1HG43	343 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	HSF5	Q4G112	596 aa	Predicted RBP	20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	SH3RF2	Q8TEC5	729 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	KCNN1	Q92952	543 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	SLC22A12	Q96S37	553 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	GTPBP2	Q9BX10	602 aa	Known RBP	20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	DPP3	Q9NY33	737 aa		20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	BCCIP	Q9P287	314 aa	Known RBP eCLIP	20.73	■□□□□ 0.91
CDK5RAP2-218	ENST00000491334	MBD1	Q9UIS9	605 aa	Predicted RBP	20.73	■□□□□ 0.91

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms