RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TMLHEQ9NVH6 421 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 DUS2Q9NX74 493 aaKnown RBP22.23■■□□□ 1.15
CLIP2-208ENST00000491075 FAM208BQ5VWN6 2430 aa22.23■■□□□ 1.15
CLIP2-208ENST00000491075 THADAQ6YHU6 1953 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 TISP43B9A030 160 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 TADA3O75528 432 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 NOL4O94818 638 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 IFNAR2P48551 515 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 NOVA1P51513 510 aaKnown RBP22.22■■□□□ 1.15
CLIP2-208ENST00000491075 USP4Q13107 963 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 MCM6Q14566 821 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 C11orf74Q86VG3 221 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 RAD54LQ92698 747 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 EZH1Q92800 747 aaPredicted RBP22.22■■□□□ 1.15
CLIP2-208ENST00000491075 MYRFLQ96LU7 910 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 ZZEF1O43149 2961 aa22.22■■□□□ 1.15
CLIP2-208ENST00000491075 TRAV19A0A0A6YYK7 116 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 DCLK1O15075 740 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 CKMP06732 381 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 USP17L7P0C7H9 530 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 PLCG1P19174 1290 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 GBP1P32455 592 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 ZC2HC1CQ53FD0 456 aaPredicted RBP22.21■■□□□ 1.15
CLIP2-208ENST00000491075 DAB2IPQ5VWQ8 1189 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 CRELD2Q6UXH1 353 aaPredicted RBP22.21■■□□□ 1.15
CLIP2-208ENST00000491075 PDCL2Q8N4E4 241 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 RASSF8Q8NHQ8 419 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 POMGNT1Q8WZA1 660 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 HVCN1Q96D96 273 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 ACBD6Q9BR61 282 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 TRPC7Q9HCX4 862 aa22.21■■□□□ 1.15
CLIP2-208ENST00000491075 LNP1A1A4G5 178 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 C4orf47A7E2U8 309 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 DGKEP52429 567 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 NR1H3Q13133 447 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 PSMD2Q13200 908 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 POSTNQ15063 836 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 DDR2Q16832 855 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 EML3Q32P44 896 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 SDHAF4Q5VUM1 108 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 KIF2CQ99661 725 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 WNT6Q9Y6F9 365 aa22.2■■□□□ 1.14
CLIP2-208ENST00000491075 H3BQV1 296 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 CYP2F1P24903 491 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 MYL7Q01449 175 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 INTS6LQ5JSJ4 861 aaKnown RBP22.19■■□□□ 1.14
CLIP2-208ENST00000491075 PMS2CLQ68D20 193 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 UNQ6494/PRO21346Q6UXR6 183 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 TMEM86AQ8N2M4 240 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 FSIP1Q8NA03 581 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 TTC16Q8NEE8 873 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 TSTD1Q8NFU3 115 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 LARP4BQ92615 738 aaKnown RBP22.19■■□□□ 1.14
CLIP2-208ENST00000491075 SLC22A12Q96S37 553 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 DDX43Q9NXZ2 648 aaKnown RBP22.19■■□□□ 1.14
CLIP2-208ENST00000491075 L1RE1Q9UN81 338 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 ABCA7Q8IZY2 2146 aa22.19■■□□□ 1.14
CLIP2-208ENST00000491075 HUS1O60921 280 aa22.18■■□□□ 1.14
CLIP2-208ENST00000491075 POLR2BP30876 1174 aaKnown RBP22.18■■□□□ 1.14
CLIP2-208ENST00000491075 LONP1P36776 959 aaKnown RBP22.18■■□□□ 1.14
CLIP2-208ENST00000491075 ZNF252P-AS1Q0IIN9 211 aa22.18■■□□□ 1.14
CLIP2-208ENST00000491075 CFAP221Q4G0U5 840 aa22.18■■□□□ 1.14
CLIP2-208ENST00000491075 USP39Q53GS9 565 aaKnown RBP22.18■■□□□ 1.14
CLIP2-208ENST00000491075 KRI1Q8N9T8 703 aaKnown RBP22.18■■□□□ 1.14
CLIP2-208ENST00000491075 SPATA18Q8TC71 538 aa22.18■■□□□ 1.14
CLIP2-208ENST00000491075 PKMYT1Q99640 499 aa22.18■■□□□ 1.14
CLIP2-208ENST00000491075 SPEGQ15772 3267 aa22.18■■□□□ 1.14
CLIP2-208ENST00000491075 PTPRDP23468 1912 aa22.18■■□□□ 1.14
CLIP2-208ENST00000491075 CACNA1GO43497 2377 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 BMP15O95972 392 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 ITGB3P05106 788 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 TCF3P15923 654 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 ACAT1P24752 427 aaKnown RBP22.17■■□□□ 1.14
CLIP2-208ENST00000491075 ADSSP30520 456 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 TFAMQ00059 246 aaKnown RBP22.17■■□□□ 1.14
CLIP2-208ENST00000491075 KCNB1Q14721 858 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 ZNF720Q7Z2F6 126 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 LRRC52Q8N7C0 313 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 FUBP3Q96I24 572 aaKnown RBP eCLIP22.17■■□□□ 1.14
CLIP2-208ENST00000491075 CYP2S1Q96SQ9 504 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 TMEM9BQ9NQ34 198 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 PPP4R2Q9NY27 417 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 AGAP1Q9UPQ3 857 aa22.17■■□□□ 1.14
CLIP2-208ENST00000491075 C1QTNF9BB2RNN3 333 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 GIPC1O14908 333 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 KHNYNO15037 678 aaKnown RBP22.16■■□□□ 1.14
CLIP2-208ENST00000491075 PPP1R37O75864 691 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 NFATC1O95644 943 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 C1QTNF9P0C862 333 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 PDE6CP51160 858 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 SH3PXD2AQ5TCZ1 1133 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 CYP2U1Q7Z449 544 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 RASSF3Q86WH2 238 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 SFR1Q86XK3 245 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 SPATA2LQ8IUW3 424 aaPredicted RBP22.16■■□□□ 1.14
CLIP2-208ENST00000491075 BRSK2Q8IWQ3 736 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 C1orf127Q8N9H9 656 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 SH3RF2Q8TEC5 729 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 USP33Q8TEY7 942 aa22.16■■□□□ 1.14
CLIP2-208ENST00000491075 CACTINQ8WUQ7 758 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms