RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 F11P03951 625 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 FCHO2Q0JRZ9 810 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 BIRC3Q13489 604 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 MYLPFQ96A32 169 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 SNX25Q9H3E2 840 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 PTPRDP23468 1912 aa33.55■■■□□ 2.96
LDB1-204ENST00000490751 PATJQ8NI35 1801 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 PROB1E7EW31 1015 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 ARNTLO00327 626 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 TACC1O75410 805 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 KIF20AO95235 890 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 WEE1P30291 646 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 ATICP31939 592 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 AP3M2P53677 418 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 NUCB2P80303 420 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 TDRD10Q5VZ19 366 aaKnown RBP33.54■■■□□ 2.96
LDB1-204ENST00000490751 SCN4BQ8IWT1 228 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 SYAP1Q96A49 352 aaPredicted RBP33.54■■■□□ 2.96
LDB1-204ENST00000490751 LRRC3BQ96PB8 259 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 NELL2Q99435 816 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 SLC46A2Q9BY10 475 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 XYLT2Q9H1B5 865 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 OBP2AQ9NY56 170 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 MAGEC2Q9UBF1 373 aaPredicted RBP33.54■■■□□ 2.96
LDB1-204ENST00000490751 NXF1Q9UBU9 619 aaKnown RBP33.54■■■□□ 2.96
LDB1-204ENST00000490751 MRPS17Q9Y2R5 130 aaKnown RBP33.54■■■□□ 2.96
LDB1-204ENST00000490751 NME7Q9Y5B8 376 aa33.54■■■□□ 2.96
LDB1-204ENST00000490751 SLC38A8A6NNN8 435 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 CHADO15335 359 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 CALUO43852 315 aaPredicted RBP33.53■■■□□ 2.96
LDB1-204ENST00000490751 NOL4O94818 638 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 MAGEA11P43364 429 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 CLDN10P78369 228 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 MAPRE1Q15691 268 aaKnown RBP33.53■■■□□ 2.96
LDB1-204ENST00000490751 CEP135Q66GS9 1140 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 FRMD5Q7Z6J6 570 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 C1orf210Q8IVY1 113 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 OR6B3Q8NGW1 331 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 ZMYM5Q9UJ78 669 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 TRAF3IP3Q9Y228 551 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 PIAS3Q9Y6X2 628 aa33.53■■■□□ 2.96
LDB1-204ENST00000490751 ZNF638Q14966 1978 aaKnown RBP33.52■■■□□ 2.96
LDB1-204ENST00000490751 MAN2B1O00754 1011 aa33.52■■■□□ 2.96
LDB1-204ENST00000490751 FAM163BP0C2L3 166 aa33.52■■■□□ 2.96
LDB1-204ENST00000490751 GNL1P36915 607 aaPredicted RBP33.52■■■□□ 2.96
LDB1-204ENST00000490751 CSGALNACT1Q8TDX6 532 aa33.52■■■□□ 2.96
LDB1-204ENST00000490751 SMG9Q9H0W8 520 aaKnown RBP33.52■■■□□ 2.96
LDB1-204ENST00000490751 UXTQ9UBK9 157 aaPredicted RBP33.52■■■□□ 2.96
LDB1-204ENST00000490751 MAPK8IP1Q9UQF2 711 aa33.52■■■□□ 2.96
LDB1-204ENST00000490751 NCAM2O15394 837 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 GFRA3O60609 400 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 C4BPAP04003 597 aaKnown RBP33.51■■■□□ 2.95
LDB1-204ENST00000490751 DLG4P78352 724 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 CYP27A1Q02318 531 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 KCNB1Q14721 858 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 CMTM8Q8IZV2 173 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 MAB21L3Q8N8X9 362 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 MYCBPAPQ8TBZ2 947 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 MRPS31Q92665 395 aaKnown RBP33.51■■■□□ 2.95
LDB1-204ENST00000490751 TRMT2BQ96GJ1 504 aaKnown RBP33.51■■■□□ 2.95
LDB1-204ENST00000490751 NDRG2Q9UN36 371 aaKnown RBP33.51■■■□□ 2.95
LDB1-204ENST00000490751 FRMD4BQ9Y2L6 1034 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 GREB1Q4ZG55 1949 aa33.51■■■□□ 2.95
LDB1-204ENST00000490751 CLSTN1O94985 981 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 BDNFP23560 247 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 DDX6P26196 483 aaKnown RBP eCLIP33.5■■■□□ 2.95
LDB1-204ENST00000490751 MAGEA9P43362 315 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 NCOA4Q13772 614 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 ZNF699Q32M78 642 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 ARHGAP29Q52LW3 1261 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 MDH1BQ5I0G3 518 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 VSTM1Q6UX27 236 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 BPIFB1Q8TDL5 484 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 CLDN23Q96B33 292 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 CCDC34Q96HJ3 373 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 PCED1BQ96HM7 432 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 MYRFLQ96LU7 910 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 VRTNQ9H8Y1 702 aa33.5■■■□□ 2.95
LDB1-204ENST00000490751 SPATA6Q9NWH7 488 aaPredicted RBP33.5■■■□□ 2.95
LDB1-204ENST00000490751 MYO15AQ9UKN7 3530 aa33.49■■■□□ 2.95
LDB1-204ENST00000490751 TADA3O75528 432 aa33.49■■■□□ 2.95
LDB1-204ENST00000490751 AVPR1AP37288 418 aa33.49■■■□□ 2.95
LDB1-204ENST00000490751 TXNDC8Q6A555 127 aa33.49■■■□□ 2.95
LDB1-204ENST00000490751 GUF1Q8N442 669 aaKnown RBP33.49■■■□□ 2.95
LDB1-204ENST00000490751 CELF5Q8N6W0 485 aaKnown RBP33.49■■■□□ 2.95
LDB1-204ENST00000490751 TMC2Q8TDI7 906 aa33.49■■■□□ 2.95
LDB1-204ENST00000490751 FAM3CQ92520 227 aa33.49■■■□□ 2.95
LDB1-204ENST00000490751 ZFYVE19Q96K21 471 aa33.49■■■□□ 2.95
LDB1-204ENST00000490751 KIF26AQ9ULI4 1882 aaPredicted RBP33.49■■■□□ 2.95
LDB1-204ENST00000490751 F5P12259 2224 aa33.48■■■□□ 2.95
LDB1-204ENST00000490751 CACNA1IQ9P0X4 2223 aa33.48■■■□□ 2.95
LDB1-204ENST00000490751 VNN1O95497 513 aa33.48■■■□□ 2.95
LDB1-204ENST00000490751 ZNF667Q5HYK9 610 aa33.48■■■□□ 2.95
LDB1-204ENST00000490751 DPEP3Q9H4B8 488 aa33.48■■■□□ 2.95
LDB1-204ENST00000490751 SMYD3Q9H7B4 428 aa33.48■■■□□ 2.95
LDB1-204ENST00000490751 USP34Q70CQ2 3546 aa33.48■■■□□ 2.95
LDB1-204ENST00000490751 GOLGA6L4A6NEF3 574 aa33.47■■■□□ 2.95
LDB1-204ENST00000490751 A8MXQ7 604 aa33.47■■■□□ 2.95
LDB1-204ENST00000490751 NR2F2P24468 414 aa33.47■■■□□ 2.95
LDB1-204ENST00000490751 GRIK1P39086 918 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms