RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 BCO2Q9BYV7 579 aa16.42■□□□□ 0.22
VPS26A-207ENST00000490696 IMPG2Q9BZV3 1241 aa16.42■□□□□ 0.22
VPS26A-207ENST00000490696 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.42■□□□□ 0.228e-9■■■■■ 96.2
VPS26A-207ENST00000490696 MUC6Q6W4X9 2439 aa16.42■□□□□ 0.22
VPS26A-207ENST00000490696 A8MXQ7 604 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 GOLGA6L22H0YM25 854 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 GJA1P17302 382 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 PTPN1P18031 435 aaKnown RBP16.41■□□□□ 0.22
VPS26A-207ENST00000490696 SIGLEC14Q08ET2 396 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 MDH1BQ5I0G3 518 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 TMEM31Q5JXX7 168 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 SDHAF4Q5VUM1 108 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 PARM1Q6UWI2 310 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 TRIM67Q6ZTA4 783 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 GAREM2Q75VX8 874 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 SLC44A3Q8N4M1 653 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 MLKLQ8NB16 471 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 B3GALNT2Q8NCR0 500 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 ST13P5Q8NFI4 369 aaPredicted RBP16.41■□□□□ 0.22
VPS26A-207ENST00000490696 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 GPR152Q8TDT2 470 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 FGF14Q92915 247 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 RPP25Q9BUL9 199 aaKnown RBP16.41■□□□□ 0.22
VPS26A-207ENST00000490696 IL21Q9HBE4 155 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 RAB20Q9NX57 234 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
VPS26A-207ENST00000490696 RWDD2AQ9UIY3 292 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 COQ4Q9Y3A0 265 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 NUMBLQ9Y6R0 609 aa16.41■□□□□ 0.22
VPS26A-207ENST00000490696 A0A1W2PRU2 124 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 HMGA1P17096 107 aaKnown RBP16.4■□□□□ 0.22
VPS26A-207ENST00000490696 BDNFP23560 247 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 RPL10AP62906 217 aaKnown RBP16.4■□□□□ 0.22
VPS26A-207ENST00000490696 CYP27A1Q02318 531 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 INCA1Q0VD86 236 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 TEAD2Q15562 447 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 DDR2Q16832 855 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 CCDC40Q4G0X9 1142 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 VSTM1Q6UX27 236 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 MTSS1LQ765P7 747 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 ASIC4Q96FT7 647 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 LRFN3Q9BTN0 628 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 SRRTQ9BXP5 876 aaKnown RBP16.4■□□□□ 0.22
VPS26A-207ENST00000490696 NIF3L1Q9GZT8 377 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 CYP3A43Q9HB55 503 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 HMGXB4Q9UGU5 601 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 DUSP12Q9UNI6 340 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 PTPRDP23468 1912 aa16.4■□□□□ 0.22
VPS26A-207ENST00000490696 PMM2O15305 246 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 FGF19O95750 216 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 GNA14O95837 355 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 CSH1P0DML2 217 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 CSH2P0DML3 217 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 GABRR2P28476 465 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 NDST1P52848 882 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 MARSP56192 900 aaKnown RBP16.39■□□□□ 0.21
VPS26A-207ENST00000490696 DPCR1Q3MIW9 517 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 UNC93AQ86WB7 457 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 CCDC150Q8NCX0 1101 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 STKLD1Q8NE28 680 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 FAXDC2Q96IV6 333 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 TNIP3Q96KP6 325 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 ASB16Q96NS5 453 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 B3GNT5Q9BYG0 378 aa16.39■□□□□ 0.21
VPS26A-207ENST00000490696 TMEM221A6NGB7 291 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 PRR33A8MZF0 331 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 M0R296 226 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 NARSO43776 548 aaKnown RBP16.38■□□□□ 0.21
VPS26A-207ENST00000490696 NOL4O94818 638 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
VPS26A-207ENST00000490696 FCARP24071 287 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 FMO5P49326 533 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 NLRP12P59046 1061 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 TAF12Q16514 161 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 FAM78AQ5JUQ0 283 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
VPS26A-207ENST00000490696 TMEM150AQ86TG1 271 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 ACOT1Q86TX2 421 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 TRIM59Q8IWR1 403 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 SCN4BQ8IWT1 228 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 CRYBG2Q8N1P7 616 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 MYRFLQ96LU7 910 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 TWNKQ96RR1 684 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 ZNF518BQ9C0D4 1074 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 GPR88Q9GZN0 384 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 ATXN3LQ9H3M9 355 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 TMEM30AQ9NV96 361 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 ZDBF2Q9HCK1 2354 aa16.38■□□□□ 0.21
VPS26A-207ENST00000490696 SLC38A8A6NNN8 435 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 CLDN5O00501 218 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 ECI2O75521 394 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 SRFP11831 508 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 CDC25CP30307 473 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 GRIK1P39086 918 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 CACNA2D1P54289 1103 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 ORC1Q13415 861 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 WDR44Q5JSH3 913 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 STXBP5Q5T5C0 1151 aa16.37■□□□□ 0.21
VPS26A-207ENST00000490696 TANGO2Q6ICL3 276 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms