RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 Q6ZS52 159 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 EPM2AIP1Q7L775 607 aaPredicted RBP12.68□□□□□ -0.38
SREBF2-207ENST00000490262 DPH6Q7L8W6 267 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 MON1AQ86VX9 555 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
SREBF2-207ENST00000490262 GPR161Q8N6U8 529 aaKnown RBP12.68□□□□□ -0.38
SREBF2-207ENST00000490262 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 USP13Q92995 863 aaPredicted RBP12.68□□□□□ -0.38
SREBF2-207ENST00000490262 SNX21Q969T3 373 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 HPDLQ96IR7 371 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 MYRFLQ96LU7 910 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 KIAA1586Q9HCI6 787 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 TDP1Q9NUW8 608 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 HSPBP1Q9NZL4 362 aa12.68□□□□□ -0.38
SREBF2-207ENST00000490262 CACNA1AO00555 2505 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 DNAH14Q0VDD8 3507 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 ATP2C2O75185 946 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 NOL4O94818 638 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 PAPSS2O95340 614 aaPredicted RBP12.67□□□□□ -0.38
SREBF2-207ENST00000490262 RUNX3Q13761 415 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 PUM1Q14671 1186 aaKnown RBP eCLIP12.67□□□□□ -0.38
SREBF2-207ENST00000490262 FAM26FQ5R3K3 315 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 FOXD4L5Q5VV16 416 aaPredicted RBP12.67□□□□□ -0.38
SREBF2-207ENST00000490262 FAM171BQ6P995 826 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 LIMS2Q7Z4I7 341 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 WDR49Q8IV35 697 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 SYNPOQ8N3V7 929 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 KBTBD7Q8WVZ9 684 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 FOXD4L4Q8WXT5 416 aaPredicted RBP12.67□□□□□ -0.38
SREBF2-207ENST00000490262 TRMT2BQ96GJ1 504 aaKnown RBP12.67□□□□□ -0.38
SREBF2-207ENST00000490262 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
SREBF2-207ENST00000490262 C7orf25Q9BPX7 421 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 EBF3Q9H4W6 596 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 KIF9Q9HAQ2 790 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 HPS4Q9NQG7 708 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 DLL3Q9NYJ7 618 aa12.67□□□□□ -0.38
SREBF2-207ENST00000490262 UXTQ9UBK9 157 aaPredicted RBP12.67□□□□□ -0.38
SREBF2-207ENST00000490262 GREB1Q4ZG55 1949 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 CHURC1-FNTBB4DL54 471 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 K7ESF4 209 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 POLR2DO15514 142 aaKnown RBP12.66□□□□□ -0.38
SREBF2-207ENST00000490262 TGFB1I1O43294 461 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 TADA3O75528 432 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 LMO2P25791 158 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 MAGEA11P43364 429 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 FNTBP49356 437 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 DMWDQ09019 674 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 ZNF268Q14587 947 aaPredicted RBP12.66□□□□□ -0.38
SREBF2-207ENST00000490262 SNRNP35Q16560 246 aaKnown RBP12.66□□□□□ -0.38
SREBF2-207ENST00000490262 LPAL2Q16609 132 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 RSPO4Q2I0M5 234 aaPredicted RBP12.66□□□□□ -0.38
SREBF2-207ENST00000490262 FOXD4L6Q3SYB3 417 aaPredicted RBP12.66□□□□□ -0.38
SREBF2-207ENST00000490262 TRIM68Q6AZZ1 485 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 CC2D1AQ6P1N0 951 aaPredicted RBP12.66□□□□□ -0.38
SREBF2-207ENST00000490262 FOXD4L3Q6VB84 417 aaPredicted RBP12.66□□□□□ -0.38
SREBF2-207ENST00000490262 C4orf50Q6ZRC1 276 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 TRAPPC11Q7Z392 1133 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 DGLUCYQ7Z3D6 616 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 SCN4BQ8IWT1 228 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 SYT15Q9BQS2 421 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 MAGEF1Q9HAY2 307 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 AGPAT3Q9NRZ7 376 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 C2orf42Q9NWW7 574 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 GMEB2Q9UKD1 530 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 CDH9Q9ULB4 789 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 RAB23Q9ULC3 237 aa12.66□□□□□ -0.38
SREBF2-207ENST00000490262 OTOL1A6NHN0 477 aaPredicted RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 CLIC2O15247 247 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 HRO43593 1189 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 CST3P01034 146 aaPredicted RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 PDGFRBP09619 1106 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 ZSCAN22P10073 491 aaPredicted RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 DLATP10515 647 aaKnown RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 PDIA4P13667 645 aaKnown RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 TNNI1P19237 187 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 TGM1P22735 817 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 WARSP23381 471 aaKnown RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 CASP1P29466 404 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 CNR2P34972 360 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 PSMC1P62191 440 aaKnown RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 SNRPFP62306 86 aaKnown RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 FAM160A1Q05DH4 1040 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 EHHADHQ08426 723 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 TMEM196Q5HYL7 178 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
SREBF2-207ENST00000490262 LAIR1Q6GTX8 287 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 PRR23BQ6ZRT6 265 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 UNC13DQ70J99 1090 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 LONP2Q86WA8 852 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 NELFCDQ8IXH7 590 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 FSIP1Q8NA03 581 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 RIN3Q8TB24 985 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 SCFD1Q8WVM8 642 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 MYLPFQ96A32 169 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 CHFRQ96EP1 664 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 SLC22A12Q96S37 553 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 CYP2S1Q96SQ9 504 aa12.65□□□□□ -0.38
SREBF2-207ENST00000490262 MMS19Q96T76 1030 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms