RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 RIN3Q8TB24 985 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 EZH1Q92800 747 aaPredicted RBP8.86□□□□□ -0.99
USP39-216ENST00000490193 ZDHHC16Q969W1 377 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 ACDQ96AP0 544 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 HHIPQ96QV1 700 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 P2RY13Q9BPV8 354 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 ADAM33Q9BZ11 813 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 RPF1Q9H9Y2 349 aaKnown RBP8.86□□□□□ -0.99
USP39-216ENST00000490193 CPSF3Q9UKF6 684 aaKnown RBP8.86□□□□□ -0.99
USP39-216ENST00000490193 ODF2LQ9ULJ1 636 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 PCDHB6Q9Y5E3 794 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 NBEAQ8NFP9 2946 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 ABCA7Q8IZY2 2146 aa8.86□□□□□ -0.99
USP39-216ENST00000490193 C4orf47A7E2U8 309 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 GIPC1O14908 333 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 HNRNPDLO14979 420 aaKnown RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 ARSAP15289 507 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 GJA4P35212 333 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 LIG4P49917 911 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 HMGN5P82970 282 aaKnown RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 POU5F1Q01860 360 aaKnown RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 CREB5Q02930 508 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 RAD51AP2Q09MP3 1159 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 USP4Q13107 963 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 GNL2Q13823 731 aaKnown RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 DMC1Q14565 340 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 TMEM132DQ14C87 1099 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 ZNF77Q15935 545 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 TAF12Q16514 161 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 ARSHQ5FYA8 562 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 SH3PXD2AQ5TCZ1 1133 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 DTHD1Q6ZMT9 781 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 LRRTM3Q86VH5 581 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 RASSF3Q86WH2 238 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 METTL23Q86XA0 190 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 THEM5Q8N1Q8 247 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 CPA6Q8N4T0 437 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 MAB21L3Q8N8X9 362 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 RPLP0P6Q8NHW5 317 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 CCDC26Q8TAB7 109 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 GIPC2Q8TF65 315 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 LEO1Q8WVC0 666 aaPredicted RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 MRPS31Q92665 395 aaKnown RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 GATA6Q92908 595 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 BICD1Q96G01 975 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 TRMT2BQ96GJ1 504 aaKnown RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 PNMA5Q96PV4 448 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 ASB7Q9H672 318 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 TMEM206Q9H813 350 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 ECT2Q9H8V3 914 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 POLR3BQ9NW08 1133 aaPredicted RBP8.85□□□□□ -0.99
USP39-216ENST00000490193 C2CD2Q9Y426 696 aa8.85□□□□□ -0.99
USP39-216ENST00000490193 ITPR1Q14643 2758 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 ASCC3Q8N3C0 2202 aaKnown RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 ANKRD11Q6UB99 2663 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 CYB561D2O14569 222 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 CDX4O14627 284 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 KHNYNO15037 678 aaKnown RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 DCLK1O15075 740 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 TADA3O75528 432 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 NFICP08651 508 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 PLA2G4BP0C869 781 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 CSH1P0DML2 217 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 CSH2P0DML3 217 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 TCF3P15923 654 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 NMT1P30419 496 aaKnown RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 ABCD1P33897 745 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 TAF6P49848 677 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 ZNF131P52739 623 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 ATP2C1P98194 919 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 FAM160A1Q05DH4 1040 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 FOXC1Q12948 553 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 MTF1Q14872 753 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 TMEM119Q4V9L6 283 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 NAIF1Q69YI7 327 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 TXNDC8Q6A555 127 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 CC2D1AQ6P1N0 951 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 SLC39A4Q6P5W5 647 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 CCDC83Q8IWF9 413 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 DCP1BQ8IZD4 617 aaKnown RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 OSCP1Q8WVF1 389 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 CD101Q93033 1021 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 ATP2A3Q93084 1043 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 CNOT6LQ96LI5 555 aaKnown RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 MYRFLQ96LU7 910 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 MSTO1Q9BUK6 570 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 ABCB6Q9NP58 842 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 TMEM9BQ9NQ34 198 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 ABI2Q9NYB9 513 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 UXTQ9UBK9 157 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 EVLQ9UI08 416 aaPredicted RBP8.84□□□□□ -0.99
USP39-216ENST00000490193 RABGEF1Q9UJ41 708 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 LIMCH1Q9UPQ0 1083 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 PCDHB5Q9Y5E4 795 aa8.84□□□□□ -0.99
USP39-216ENST00000490193 PCNX2A6NKB5 2137 aa8.83□□□□□ -1
USP39-216ENST00000490193 FREM2Q5SZK8 3169 aa8.83□□□□□ -1
USP39-216ENST00000490193 SLC26A4O43511 780 aa8.83□□□□□ -1
USP39-216ENST00000490193 NOL4O94818 638 aa8.83□□□□□ -1
USP39-216ENST00000490193 DGKEP52429 567 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms