RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 TRAK2O60296 914 aa15.04■□□□□ -0
VARS-227ENST00000489979 SCP2P22307 547 aa15.04■□□□□ -0
VARS-227ENST00000489979 IFNAR2P48551 515 aa15.04■□□□□ -0
VARS-227ENST00000489979 ZNF131P52739 623 aa15.04■□□□□ -0
VARS-227ENST00000489979 TSPY1Q01534 308 aa15.04■□□□□ -0
VARS-227ENST00000489979 USP39Q53GS9 565 aaKnown RBP15.04■□□□□ -0
VARS-227ENST00000489979 PMS2CLQ68D20 193 aa15.04■□□□□ -0
VARS-227ENST00000489979 ADALQ6DHV7 355 aa15.04■□□□□ -0
VARS-227ENST00000489979 TSTD1Q8NFU3 115 aa15.04■□□□□ -0
VARS-227ENST00000489979 ZSCAN31Q96LW9 406 aaPredicted RBP15.04■□□□□ -0
VARS-227ENST00000489979 SLC22A12Q96S37 553 aa15.04■□□□□ -0
VARS-227ENST00000489979 CYP2S1Q96SQ9 504 aa15.04■□□□□ -0
VARS-227ENST00000489979 TMEM121BQ9BXQ6 578 aaPredicted RBP15.04■□□□□ -0
VARS-227ENST00000489979 ADAM33Q9BZ11 813 aa15.04■□□□□ -0
VARS-227ENST00000489979 TPSD1Q9BZJ3 242 aa15.04■□□□□ -0
VARS-227ENST00000489979 ZHX3Q9H4I2 956 aa15.04■□□□□ -0
VARS-227ENST00000489979 TMEM9BQ9NQ34 198 aa15.04■□□□□ -0
VARS-227ENST00000489979 UXTQ9UBK9 157 aaPredicted RBP15.04■□□□□ -0
VARS-227ENST00000489979 PATE3B3GLJ2 98 aa15.03■□□□□ -0
VARS-227ENST00000489979 CDX4O14627 284 aaPredicted RBP15.03■□□□□ -0
VARS-227ENST00000489979 NOL4O94818 638 aa15.03■□□□□ -0
VARS-227ENST00000489979 CEACAM1P13688 526 aa15.03■□□□□ -0
VARS-227ENST00000489979 HOXB3P14651 431 aaPredicted RBP15.03■□□□□ -0
VARS-227ENST00000489979 BCKDHBP21953 392 aa15.03■□□□□ -0
VARS-227ENST00000489979 CYP2F1P24903 491 aa15.03■□□□□ -0
VARS-227ENST00000489979 GTF2BQ00403 316 aa15.03■□□□□ -0
VARS-227ENST00000489979 USP4Q13107 963 aa15.03■□□□□ -0
VARS-227ENST00000489979 NFE2Q16621 373 aaPredicted RBP15.03■□□□□ -0
VARS-227ENST00000489979 DDR2Q16832 855 aa15.03■□□□□ -0
VARS-227ENST00000489979 EML3Q32P44 896 aa15.03■□□□□ -0
VARS-227ENST00000489979 SV2CQ496J9 727 aa15.03■□□□□ -0
VARS-227ENST00000489979 C11orf74Q86VG3 221 aa15.03■□□□□ -0
VARS-227ENST00000489979 EFCAB13Q8IY85 973 aa15.03■□□□□ -0
VARS-227ENST00000489979 LRRC15Q8TF66 581 aa15.03■□□□□ -0
VARS-227ENST00000489979 ATP2A3Q93084 1043 aa15.03■□□□□ -0
VARS-227ENST00000489979 FIZ1Q96SL8 496 aa15.03■□□□□ -0
VARS-227ENST00000489979 AGO2Q9UKV8 859 aaKnown RBP15.03■□□□□ -0
VARS-227ENST00000489979 PTPRDP23468 1912 aa15.02■□□□□ -0
VARS-227ENST00000489979 TRAV19A0A0A6YYK7 116 aa15.02■□□□□ -0
VARS-227ENST00000489979 KRT18P05783 430 aaKnown RBP15.02■□□□□ -0
VARS-227ENST00000489979 CKMP06732 381 aa15.02■□□□□ -0
VARS-227ENST00000489979 USP17L7P0C7H9 530 aa15.02■□□□□ -0
VARS-227ENST00000489979 CSRP1P21291 193 aaKnown RBP15.02■□□□□ -0
VARS-227ENST00000489979 RPL10AP62906 217 aaKnown RBP15.02■□□□□ -0
VARS-227ENST00000489979 UAP1L1Q3KQV9 507 aa15.02■□□□□ -0
VARS-227ENST00000489979 ZC2HC1CQ53FD0 456 aaPredicted RBP15.02■□□□□ -0
VARS-227ENST00000489979 RILPL1Q5EBL4 403 aa15.02■□□□□ -0
VARS-227ENST00000489979 MCTP1Q6DN14 999 aa15.02■□□□□ -0
VARS-227ENST00000489979 ANO7Q6IWH7 933 aa15.02■□□□□ -0
VARS-227ENST00000489979 CYP2U1Q7Z449 544 aa15.02■□□□□ -0
VARS-227ENST00000489979 PDCL2Q8N4E4 241 aa15.02■□□□□ -0
VARS-227ENST00000489979 USP33Q8TEY7 942 aa15.02■□□□□ -0
VARS-227ENST00000489979 LEO1Q8WVC0 666 aaPredicted RBP15.02■□□□□ -0
VARS-227ENST00000489979 TRMT2BQ96GJ1 504 aaKnown RBP15.02■□□□□ -0
VARS-227ENST00000489979 MYRFLQ96LU7 910 aa15.02■□□□□ -0
VARS-227ENST00000489979 ZNF560Q96MR9 790 aa15.02■□□□□ -0
VARS-227ENST00000489979 SCNM1Q9BWG6 230 aa15.02■□□□□ -0
VARS-227ENST00000489979 LINC00597Q9H2U6 94 aa15.02■□□□□ -0
VARS-227ENST00000489979 TMEM206Q9H813 350 aa15.02■□□□□ -0
VARS-227ENST00000489979 GON4LQ3T8J9 2241 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 ANTXRLA6NF34 631 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 TULP1O00294 542 aaPredicted RBP15.01□□□□□ -0.01
VARS-227ENST00000489979 SEC24BO95487 1268 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 ACAT1P24752 427 aaKnown RBP15.01□□□□□ -0.01
VARS-227ENST00000489979 DHPSP49366 369 aaPredicted RBP15.01□□□□□ -0.01
VARS-227ENST00000489979 SEC13P55735 322 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 IRX4P78413 519 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 NR1H3Q13133 447 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 MCM6Q14566 821 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 C2orf27AQ580R0 203 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 SLFN12LQ6IEE8 588 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 CRELD2Q6UXH1 353 aaPredicted RBP15.01□□□□□ -0.01
VARS-227ENST00000489979 RASSF3Q86WH2 238 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 ARL14EPQ8N8R7 260 aaPredicted RBP15.01□□□□□ -0.01
VARS-227ENST00000489979 DEFB124Q8NES8 71 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 CCDC26Q8TAB7 109 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 SH3RF2Q8TEC5 729 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 PIGKQ92643 395 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 GATA6Q92908 595 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 CALML4Q96GE6 196 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 CNOT6LQ96LI5 555 aaKnown RBP15.01□□□□□ -0.01
VARS-227ENST00000489979 ACBD6Q9BR61 282 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 IKZF4Q9H2S9 585 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 ABCB6Q9NP58 842 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 BLOC1S4Q9NUP1 217 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 DDX43Q9NXZ2 648 aaKnown RBP15.01□□□□□ -0.01
VARS-227ENST00000489979 GCNT4Q9P109 453 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 STYXL1Q9Y6J8 313 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 AKAP13Q12802 2813 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 PCNX2A6NKB5 2137 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 PI4KAP42356 2102 aa15.01□□□□□ -0.01
VARS-227ENST00000489979 HELZP42694 1942 aaKnown RBP15□□□□□ -0.01
VARS-227ENST00000489979 C2orf78A6NCI8 922 aa15□□□□□ -0.01
VARS-227ENST00000489979 TMEM8BA6NDV4 472 aa15□□□□□ -0.01
VARS-227ENST00000489979 K7EQS6 105 aa15□□□□□ -0.01
VARS-227ENST00000489979 TBCAO75347 108 aaKnown RBP15□□□□□ -0.01
VARS-227ENST00000489979 POLR2BP30876 1174 aaKnown RBP15□□□□□ -0.01
VARS-227ENST00000489979 ABCD1P33897 745 aa15□□□□□ -0.01
VARS-227ENST00000489979 PNPLA4P41247 253 aa15□□□□□ -0.01
VARS-227ENST00000489979 MYL7Q01449 175 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms