RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SPATA31D4Q6ZUB0 917 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 TMC6Q7Z403 805 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 SLC47A2Q86VL8 602 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 GPIHBP1Q8IV16 184 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 TCEAL8Q8IYN2 117 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 TTC9BQ8N6N2 239 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 SLC2A14Q8TDB8 520 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 CPLX3Q8WVH0 158 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 FUBP3Q96I24 572 aaKnown RBP eCLIP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 HNRNPABQ99729 332 aaKnown RBP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 ZNF518BQ9C0D4 1074 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 ABCB6Q9NP58 842 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 ABI2Q9NYB9 513 aaPredicted RBP17.1■□□□□ 0.33
CLIC4-203ENST00000489758 MAFFQ9ULX9 164 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 PCDHB5Q9Y5E4 795 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 HCFC2Q9Y5Z7 792 aa17.1■□□□□ 0.33
CLIC4-203ENST00000489758 O00370 1275 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 CD19P15391 556 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 CYP27A1Q02318 531 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 DUSP4Q13115 394 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 ARID5BQ14865 1188 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 COL19A1Q14993 1142 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 SGO2Q562F6 1265 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 C4orf50Q6ZRC1 276 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 IRF2BP2Q7Z5L9 587 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 FAM35AQ86V20 835 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 SPATA2LQ8IUW3 424 aaPredicted RBP17.09■□□□□ 0.33
CLIC4-203ENST00000489758 EFHBQ8N7U6 833 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 KREMEN2Q8NCW0 462 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 SPPL2BQ8TCT7 592 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 PPP2R3CQ969Q6 453 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 DNAI2Q9GZS0 605 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 TMEM30AQ9NV96 361 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 AIPL1Q9NZN9 384 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 HSFX1Q9UBD0 423 aa17.09■□□□□ 0.33
CLIC4-203ENST00000489758 COL6A3P12111 3177 aa17.08■□□□□ 0.33
CLIC4-203ENST00000489758 LINC01565O15544 149 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 GLP2RO95838 553 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 HAPLN1P10915 354 aaPredicted RBP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 CYP11B1P15538 503 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 CYP2F1P24903 491 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 GNA15P30679 374 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 MAGEA11P43364 429 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 CACNA2D1P54289 1103 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 BPIFB4P59827 614 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 PTK2Q05397 1052 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 CNGA2Q16280 664 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 TMEM184AQ6ZMB5 413 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 NOP9Q86U38 636 aaKnown RBP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 EPS8L1Q8TE68 723 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 DDX1Q92499 740 aaKnown RBP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 SYN2Q92777 582 aaPredicted RBP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 NOCTQ9UK39 431 aaKnown RBP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 SLC27A5Q9Y2P5 690 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 LUC7L2Q9Y383 392 aaKnown RBP17.08■□□□□ 0.32
CLIC4-203ENST00000489758 ATG2AQ2TAZ0 1938 aa17.08■□□□□ 0.32
CLIC4-203ENST00000489758 MFAP3LO75121 409 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 CFHP08603 1231 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 FERP16591 822 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 BDNFP23560 247 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 ADORA2BP29275 332 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 KRT9P35527 623 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 CTC1Q2NKJ3 1217 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 GOLGA7BQ2TAP0 167 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 PKDCCQ504Y2 493 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 SFMBT2Q5VUG0 894 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 TTC30AQ86WT1 665 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 ZNF397Q8NF99 534 aaPredicted RBP17.07■□□□□ 0.32
CLIC4-203ENST00000489758 MAFAQ8NHW3 353 aaPredicted RBP17.07■□□□□ 0.32
CLIC4-203ENST00000489758 HDAC7Q8WUI4 952 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 ZNF606Q8WXB4 792 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 DNAJC7Q99615 494 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 NUCKS1Q9H1E3 243 aaKnown RBP17.07■□□□□ 0.32
CLIC4-203ENST00000489758 PLEKHA4Q9H4M7 779 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 IGFLR1Q9H665 355 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 CYP4F11Q9HBI6 524 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 MAN1C1Q9NR34 630 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 KRT82Q9NSB4 513 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 TSPAN16Q9UKR8 245 aa17.07■□□□□ 0.32
CLIC4-203ENST00000489758 PRRG1O14668 218 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 THAP12O43422 761 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 SOAT2O75908 522 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 BEST1O76090 585 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 MICAL2O94851 1124 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 PAPLNO95428 1278 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 C8AP07357 584 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 FOSL2P15408 326 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 HNRNPH3P31942 346 aaKnown RBP17.06■□□□□ 0.32
CLIC4-203ENST00000489758 SSTR3P32745 418 aaPredicted RBP17.06■□□□□ 0.32
CLIC4-203ENST00000489758 ARID5AQ03989 594 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 ADAM15Q13444 863 aa17.06■□□□□ 0.32
CLIC4-203ENST00000489758 VSTM1Q6UX27 236 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms