RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ANKRD52Q8NB46 1076 aa22.9■■□□□ 1.26
SMC4-221ENST00000489573 SLC2A14Q8TDB8 520 aa22.9■■□□□ 1.26
SMC4-221ENST00000489573 IPO4Q8TEX9 1081 aaKnown RBP22.9■■□□□ 1.26
SMC4-221ENST00000489573 CPXM1Q96SM3 734 aa22.9■■□□□ 1.26
SMC4-221ENST00000489573 HNRNPABQ99729 332 aaKnown RBP22.9■■□□□ 1.26
SMC4-221ENST00000489573 SYNCQ9H7C4 482 aa22.9■■□□□ 1.26
SMC4-221ENST00000489573 CRTAC1Q9NQ79 661 aa22.9■■□□□ 1.26
SMC4-221ENST00000489573 ADAM28Q9UKQ2 775 aa22.9■■□□□ 1.26
SMC4-221ENST00000489573 FNDC1Q4ZHG4 1894 aaPredicted RBP22.9■■□□□ 1.26
SMC4-221ENST00000489573 DEFB103AP81534 67 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 AMPD2Q01433 879 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 MDH1BQ5I0G3 518 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 THEM5Q8N1Q8 247 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 RTP3Q9BQQ7 232 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 ACBD6Q9BR61 282 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 GOLPH3Q9H4A6 298 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 L2HGDHQ9H9P8 463 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 PARVAQ9NVD7 372 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 MARCH5Q9NX47 278 aa22.89■■□□□ 1.26
SMC4-221ENST00000489573 ALPK3Q96L96 1907 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 GALTP07902 379 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 TKTP29401 623 aaKnown RBP22.89■■□□□ 1.25
SMC4-221ENST00000489573 GSCP56915 257 aaPredicted RBP22.89■■□□□ 1.25
SMC4-221ENST00000489573 BST2Q10589 180 aaKnown RBP22.89■■□□□ 1.25
SMC4-221ENST00000489573 MAMLD1Q13495 774 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 TUBB2AQ13885 445 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 CYP4A22Q5TCH4 519 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 MEI1Q5TIA1 1274 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 DNAJC24Q6P3W2 148 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 C18orf8Q96DM3 657 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 TUBB2BQ9BVA1 445 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 TLR10Q9BXR5 811 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 PCDH10Q9P2E7 1040 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 WDR35Q9P2L0 1181 aa22.89■■□□□ 1.25
SMC4-221ENST00000489573 TCRBV5S1A1TA0A578 114 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 SYN3O14994 580 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 NCK2O43639 380 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 ERBB2P04626 1255 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 GABRB2P47870 512 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 YWHAHQ04917 246 aaPredicted RBP22.88■■□□□ 1.25
SMC4-221ENST00000489573 PDE4CQ08493 712 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 CCDC142Q17RM4 750 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 PEX26Q7Z412 305 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 C7orf61Q8IZ16 206 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 FUKQ8N0W3 1084 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 C3orf20Q8ND61 904 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 STK32AQ8WU08 396 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 MIS12Q9H081 205 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 ABCB6Q9NP58 842 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 ST7Q9NRC1 585 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 TJP2Q9UDY2 1190 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 ANAPC7Q9UJX3 599 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 MRFAP1Q9Y605 127 aa22.88■■□□□ 1.25
SMC4-221ENST00000489573 COL4A6Q14031 1691 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 MYH10P35580 1976 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 PLCB3Q01970 1234 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 FPGSQ05932 587 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 INTS6LQ5JSJ4 861 aaKnown RBP22.87■■□□□ 1.25
SMC4-221ENST00000489573 MYCBPAPQ8TBZ2 947 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 SLC35F5Q8WV83 523 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 BADQ92934 168 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 MED10Q9BTT4 135 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 CDC23Q9UJX2 597 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 AMFRQ9UKV5 643 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 SNX12Q9UMY4 172 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 HYOU1Q9Y4L1 999 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 SAR1BQ9Y6B6 198 aa22.87■■□□□ 1.25
SMC4-221ENST00000489573 SF3B1O75533 1304 aaKnown RBP eCLIP22.86■■□□□ 1.257e-33■■■■■ 320.9
SMC4-221ENST00000489573 MYBPHLA2RUH7 354 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 TMEM110-MUSTN1A8MSY1 372 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 RIOK3O14730 519 aaKnown RBP22.86■■□□□ 1.25
SMC4-221ENST00000489573 BCAR1P56945 870 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 ELAVL2Q12926 359 aaKnown RBP22.86■■□□□ 1.25
SMC4-221ENST00000489573 ZNF268Q14587 947 aaPredicted RBP22.86■■□□□ 1.25
SMC4-221ENST00000489573 MESDQ14696 234 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 OTOP2Q7RTS6 562 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 NT5DC3Q86UY8 548 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 XYLT1Q86Y38 959 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 FEZF2Q8TBJ5 459 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 ZNF689Q96CS4 500 aaPredicted RBP22.86■■□□□ 1.25
SMC4-221ENST00000489573 BTBD6Q96KE9 485 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 SLC4A5Q9BY07 1137 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 B3GNT5Q9BYG0 378 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 CWH43Q9H720 699 aa22.86■■□□□ 1.25
SMC4-221ENST00000489573 RC3H2Q9HBD1 1191 aaKnown RBP22.86■■□□□ 1.25
SMC4-221ENST00000489573 TULP2O00295 520 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 CLDN5O00501 218 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 PRLRP16471 622 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 RGS7P49802 495 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 SLC8A3P57103 927 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 SNX16P57768 344 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 TSPY1Q01534 308 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 TAP1Q03518 808 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 PMF1Q6P1K2 205 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 FAM117BQ6P1L5 589 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 FUT10Q6P4F1 479 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 PAQR9Q6ZVX9 377 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 OR10T2Q8NGX3 314 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 PCED1BQ96HM7 432 aa22.85■■□□□ 1.25
SMC4-221ENST00000489573 SELENOOQ9BVL4 669 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms