RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 OR5B17Q8NGF7 314 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CXorf38Q8TB03 319 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 GPR152Q8TDT2 470 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 MCRS1Q96EZ8 462 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 PDLIM2Q96JY6 352 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 TMEM209Q96SK2 561 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CGRRF1Q99675 332 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 RTP3Q9BQQ7 232 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 RPP25Q9BUL9 199 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 XPO4Q9C0E2 1151 aaKnown RBP11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 GPR88Q9GZN0 384 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 VPS16Q9H269 839 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 NDST4Q9H3R1 872 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 ARHGEF3Q9NR81 526 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 GDAP2Q9NXN4 497 aa11.3□□□□□ -0.6
SCAMP4-208ENST00000489554 KRBA1A5PL33 1030 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 PMM2O15305 246 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 MYL4P12829 197 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 CDK11BP21127 795 aaKnown RBP11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 RFX1P22670 979 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 CCR2P41597 374 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 GPC5P78333 572 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 KCNMA1Q12791 1236 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 KCNH2Q12809 1159 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 VEPH1Q14D04 833 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 PHLDB3Q6NSJ2 640 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 DPH6Q7L8W6 267 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 PDCL2Q8N4E4 241 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 TOP6BLQ8N6T0 577 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 ST13P5Q8NFI4 369 aaPredicted RBP11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 LMO3Q8TAP4 145 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 SPPL2BQ8TCT7 592 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 PSMG2Q969U7 264 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 ELSPBP1Q96BH3 223 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 CCDC127Q96BQ5 260 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 TCEAL4Q96EI5 215 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 SHDQ96IW2 340 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 FNBP1Q96RU3 617 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 KXD1Q9BQD3 176 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 ACBD6Q9BR61 282 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 ZFP14Q9HCL3 533 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 MAGEC2Q9UBF1 373 aaPredicted RBP11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 SIX4Q9UIU6 781 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 L1RE1Q9UN81 338 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 SLC27A5Q9Y2P5 690 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 KMT2EQ8IZD2 1858 aa11.29□□□□□ -0.6
SCAMP4-208ENST00000489554 TSC2P49815 1807 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 STK25O00506 426 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 LRRN2O75325 713 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 VNN1O95497 513 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 AFPP02771 609 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 C4BPAP04003 597 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 KRT13P13646 458 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 PRKCSHP14314 528 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 TNNI1P19237 187 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 GCLMP48507 274 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 LHX1P48742 406 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 FMO5P49326 533 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 UBASH3AP57075 661 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 MYL7Q01449 175 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 TCF15Q12870 199 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 NFE2Q16621 373 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 MGAT5BQ3V5L5 792 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 DCAF17Q5H9S7 520 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 FAM78AQ5JUQ0 283 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 DNAJB7Q7Z6W7 309 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 TMC8Q8IU68 726 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 ADGRF2Q8IZF7 708 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 TTC9BQ8N6N2 239 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 SMARCD2Q92925 531 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 HPDLQ96IR7 371 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 ASB16Q96NS5 453 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 ERGIC2Q96RQ1 377 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 SEPT5Q99719 369 aaPredicted RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 LRRC3Q9BY71 257 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 TBC1D17Q9HA65 648 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 DDX43Q9NXZ2 648 aaKnown RBP11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 SIK3Q9Y2K2 1263 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 COQ4Q9Y3A0 265 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 PCDHB5Q9Y5E4 795 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 SNX9Q9Y5X1 595 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 NOTCH4Q99466 2003 aa11.28□□□□□ -0.6
SCAMP4-208ENST00000489554 SCN1AP35498 2009 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 DOCK6Q96HP0 2047 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 GABRDO14764 452 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 MOSPD3O75425 235 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 ADCY5O95622 1261 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 SERPINC1P01008 464 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 HAPLN1P10915 354 aaPredicted RBP11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 FCARP24071 287 aa11.27□□□□□ -0.61
SCAMP4-208ENST00000489554 PCSK1P29120 753 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms