RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 ZNF286BP0CG31 522 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 VSIG8P0DPA2 414 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 KCNE1P15382 129 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 CHRNB2P17787 502 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 MMP8P22894 467 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 CST5P28325 142 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 HOXC8P31273 242 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 CTNNA1P35221 906 aaKnown RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 SCNN1AP37088 669 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 FNTAP49354 379 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 MYL6P60660 151 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 ADAM17P78536 824 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 CAV1Q03135 178 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 GABPB1Q06547 395 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 INCA1Q0VD86 236 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 DRP2Q13474 957 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 ZNF268Q14587 947 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 CNGA2Q16280 664 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 HADHQ16836 314 aaKnown RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 SGO2Q562F6 1265 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 GNASQ5JWF2 1037 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 PLEKHA7Q6IQ23 1121 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 DCUN1D2Q6PH85 259 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 CCNI2Q6ZMN8 369 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 POLNQ7Z5Q5 900 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 ERICH1Q86X53 443 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 UBR7Q8N806 425 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 C1orf131Q8NDD1 294 aaKnown RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 COG1Q8WTW3 980 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 ATRIPQ8WXE1 791 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 HPDLQ96IR7 371 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 TNIP3Q96KP6 325 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 RNPC3Q96LT9 517 aaKnown RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 DEFB118Q96PH6 123 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 RHOXF2Q9BQY4 288 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 NT5C1AQ9BXI3 368 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 ADAMTS10Q9H324 1103 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 PRDM16Q9HAZ2 1276 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 SETD4Q9NVD3 440 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 DPP3Q9NY33 737 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 FLRT1Q9NZU1 646 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 HESX1Q9UBX0 185 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 SALL4Q9UJQ4 1053 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 AJAP1Q9UKB5 411 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-208ENST00000489537 L1RE1Q9UN81 338 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 EFR3BQ9Y2G0 817 aa6.74□□□□□ -1.33
SF3A3-208ENST00000489537 EYSQ5T1H1 3165 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-208ENST00000489537 GOLGA6L10A6NI86 522 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 MAP2K7O14733 419 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CILPO75339 1184 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 GPR32O75388 356 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 PROSCO94903 275 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 FGGP02679 453 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 VTNP04004 478 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 C6orf222P0C671 652 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-208ENST00000489537 PNMA6AP0CW24 399 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CXCL8P10145 99 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CYBAP13498 195 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CD19P15391 556 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CYP2B6P20813 491 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 COMTP21964 271 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 ACADSBP45954 432 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CDR1P51861 262 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 NOMO3P69849 1222 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 PURAQ00577 322 aaKnown RBP6.73□□□□□ -1.33
SF3A3-208ENST00000489537 MESDQ14696 234 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 SV2CQ496J9 727 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 BEND6Q5SZJ8 279 aaPredicted RBP6.73□□□□□ -1.33
SF3A3-208ENST00000489537 MARCH8Q5T0T0 291 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 MAP3K21Q5TCX8 1036 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 TAF3Q5VWG9 929 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 DNAJC24Q6P3W2 148 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 MON1BQ7L1V2 547 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 RNF180Q86T96 592 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 VSIG1Q86XK7 387 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 RCOR2Q8IZ40 523 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 MREGQ8N565 214 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 NIPA2Q8N8Q9 360 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 TRPV1Q8NER1 839 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 OR5B17Q8NGF7 314 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 FEZF2Q8TBJ5 459 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 STK32AQ8WU08 396 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 SLC20A1Q8WUM9 679 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 TRAPPC12Q8WVT3 735 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CAVIN3Q969G5 261 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 PGBD4Q96DM1 585 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 C18orf8Q96DM3 657 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 TMEM176AQ96HP8 235 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 PI4K2AQ9BTU6 479 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 TRAIPQ9BWF2 469 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CELF4Q9BZC1 486 aaKnown RBP6.73□□□□□ -1.33
SF3A3-208ENST00000489537 FOXP3Q9BZS1 431 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 HAPLN2Q9GZV7 340 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 XYLT2Q9H1B5 865 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 SYNCQ9H7C4 482 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 CNTN3Q9P232 1028 aa6.73□□□□□ -1.33
SF3A3-208ENST00000489537 MTRF1LQ9UGC7 380 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms