RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 AMACRQ9UHK6 382 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 ANAPC7Q9UJX3 599 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 TELO2Q9Y4R8 837 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 PCDHB4Q9Y5E5 795 aa8.97□□□□□ -0.97
VTI1A-207ENST00000489357 TTI1O43156 1089 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 C22orf31O95567 290 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 GAS8O95995 478 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 MMP3P08254 477 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 NUDT17P0C025 328 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 TMEM191BP0C7N4 346 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 MMP8P22894 467 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 POLR2BP30876 1174 aaKnown RBP8.96□□□□□ -0.98
VTI1A-207ENST00000489357 HOXC8P31273 242 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 PTPN7P35236 360 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 SOX11P35716 441 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 CPT1AP50416 773 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 CDR1P51861 262 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 MBTD1Q05BQ5 628 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 TRPC3Q13507 836 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 SLMAPQ14BN4 828 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 ZNF568Q3ZCX4 644 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 EFCAB12Q6NXP0 572 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 TMEM270Q6UE05 265 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 TMC3Q7Z5M5 1100 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 SESTD1Q86VW0 696 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 JAMLQ86YT9 394 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 GSPT2Q8IYD1 628 aaKnown RBP8.96□□□□□ -0.98
VTI1A-207ENST00000489357 KATNAL2Q8IYT4 538 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 NIPA2Q8N8Q9 360 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 PRELID2Q8N945 189 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 BBOF1Q8ND07 529 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 EXD1Q8NHP7 514 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 CCHCR1Q8TD31 782 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 MAGOHBQ96A72 148 aaKnown RBP8.96□□□□□ -0.98
VTI1A-207ENST00000489357 ZIM3Q96PE6 472 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 C16orf70Q9BSU1 422 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 PI4K2AQ9BTU6 479 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 FOXP3Q9BZS1 431 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 SENP6Q9GZR1 1112 aaPredicted RBP8.96□□□□□ -0.98
VTI1A-207ENST00000489357 MIS12Q9H081 205 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 RPF1Q9H9Y2 349 aaKnown RBP8.96□□□□□ -0.98
VTI1A-207ENST00000489357 ADAM22Q9P0K1 906 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 WHRNQ9P202 907 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 WDR35Q9P2L0 1181 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 CDV3Q9UKY7 258 aaKnown RBP8.96□□□□□ -0.98
VTI1A-207ENST00000489357 KIAA1257Q9ULG3 409 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 EFR3BQ9Y2G0 817 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 DERAQ9Y315 318 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 NUB1Q9Y5A7 615 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 EVPLQ92817 2033 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 PTPRJQ12913 1337 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 MROH7Q68CQ1 1323 aa8.96□□□□□ -0.98
VTI1A-207ENST00000489357 TTC24A2A3L6 582 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 RRN3P2A6NIE6 340 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 POM121CA8CG34 1229 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 ARVCFO00192 962 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 CD4P01730 458 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 LGALS2P05162 132 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 WEE2P0C1S8 567 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 MYZAPP0CAP1 466 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 PYGMP11217 842 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 ITGA4P13612 1032 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 RRM1P23921 792 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 COILP38432 576 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 PTGIRP43119 386 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 LMAN1P49257 510 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 RNASE9P60153 205 aaKnown RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 MAMLD1Q13495 774 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 PIGHQ14442 188 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 ACAP1Q15027 740 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 STILQ15468 1287 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 DGKDQ16760 1214 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 ZNF699Q32M78 642 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 AGBL2Q5U5Z8 902 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 NAA35Q5VZE5 725 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 DRICH1Q6PGQ1 229 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 CCDC137Q6PK04 289 aaKnown RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 CXCL17Q6UXB2 119 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 KDM7AQ6ZMT4 941 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 POLNQ7Z5Q5 900 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 HOOK3Q86VS8 718 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 RHPN2Q8IUC4 686 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 C7orf61Q8IZ16 206 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 TSEN2Q8NCE0 465 aaKnown RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 OR5B17Q8NGF7 314 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 FEZF2Q8TBJ5 459 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 FNIP1Q8TF40 1166 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 ZNF606Q8WXB4 792 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 KRT35Q92764 455 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 RBM41Q96IZ5 413 aaKnown RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 ZBTB45Q96K62 511 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 ATP6V1G3Q96LB4 118 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 GLT1D1Q96MS3 346 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 CDK15Q96Q40 435 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 MTG1Q9BT17 334 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 BCO2Q9BYV7 579 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 FRMD8P1Q9BZ68 369 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 TXLNGYQ9BZA5 131 aa8.95□□□□□ -0.98
VTI1A-207ENST00000489357 STMN4Q9H169 189 aaPredicted RBP8.95□□□□□ -0.98
VTI1A-207ENST00000489357 APOBEC3GQ9HC16 384 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms