RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 MAN1A1P33908 653 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 ZNF268Q14587 947 aaPredicted RBP19.08■□□□□ 0.65
CD40-206ENST00000489304 UPP1Q16831 310 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 PAN2Q504Q3 1202 aaKnown RBP19.08■□□□□ 0.65
CD40-206ENST00000489304 PKDCCQ504Y2 493 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 GLB1LQ6UWU2 654 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 CPNE8Q86YQ8 564 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 KRT35Q92764 455 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 DDX27Q96GQ7 796 aaKnown RBP19.08■□□□□ 0.65
CD40-206ENST00000489304 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.08■□□□□ 0.65
CD40-206ENST00000489304 DPEP3Q9H4B8 488 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 PRDM5Q9NQX1 630 aaPredicted RBP19.08■□□□□ 0.65
CD40-206ENST00000489304 TMEM59LQ9UK28 342 aa19.08■□□□□ 0.65
CD40-206ENST00000489304 SETSIPP0DME0 302 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 H2AFXP16104 143 aaPredicted RBP19.08■□□□□ 0.64
CD40-206ENST00000489304 LMO2P25791 158 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 PDCLQ13371 301 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 TUSC3Q13454 348 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 GOLGA7BQ2TAP0 167 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 NOMO2Q5JPE7 1267 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 CYP4A22Q5TCH4 519 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.08■□□□□ 0.64
CD40-206ENST00000489304 XYLT1Q86Y38 959 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 UBA3Q8TBC4 463 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 SENP8Q96LD8 212 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 RBM12Q9NTZ6 932 aaKnown RBP19.08■□□□□ 0.64
CD40-206ENST00000489304 IP6K2Q9UHH9 426 aa19.08■□□□□ 0.64
CD40-206ENST00000489304 TSC2P49815 1807 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 I3L4J1 428 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 GABRDO14764 452 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 PDGFRBP09619 1106 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 RHOXF2BP0C7M4 288 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 PAX3P23760 479 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 BRCC3P46736 316 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 MARCKSL1P49006 195 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 AARSP49588 968 aaKnown RBP eCLIP19.07■□□□□ 0.64
CD40-206ENST00000489304 CLUL1Q15846 466 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 WSCD1Q658N2 575 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 TMEM86AQ8N2M4 240 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 HASPINQ8TF76 798 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 TNIP3Q96KP6 325 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 UROC1Q96N76 676 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 RHOXF2Q9BQY4 288 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 PARD6BQ9BYG5 372 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 ELAC1Q9H777 363 aaKnown RBP19.07■□□□□ 0.64
CD40-206ENST00000489304 PRDM10Q9NQV6 1147 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 FAM49BQ9NUQ9 324 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 PCDHB7Q9Y5E2 793 aa19.07■□□□□ 0.64
CD40-206ENST00000489304 TIMM13Q9Y5L4 95 aaPredicted RBP19.07■□□□□ 0.64
CD40-206ENST00000489304 SIGLEC16A6NMB1 481 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 GJB6O95452 261 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 ERBB2P04626 1255 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 PSMC1P62191 440 aaKnown RBP19.06■□□□□ 0.64
CD40-206ENST00000489304 RPL7AP62424 266 aaKnown RBP19.06■□□□□ 0.64
CD40-206ENST00000489304 TTC30AQ86WT1 665 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 CRIPAKQ8N1N5 446 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.06■□□□□ 0.64
CD40-206ENST00000489304 MCRS1Q96EZ8 462 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 RNPC3Q96LT9 517 aaKnown RBP19.06■□□□□ 0.64
CD40-206ENST00000489304 CASD1Q96PB1 797 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 MIS12Q9H081 205 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 TBC1D13Q9NVG8 400 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 HCSTQ9UBK5 93 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 HESX1Q9UBX0 185 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 TJP2Q9UDY2 1190 aa19.06■□□□□ 0.64
CD40-206ENST00000489304 TARSL2A2RTX5 802 aaKnown RBP19.05■□□□□ 0.64
CD40-206ENST00000489304 CAPN15O75808 1086 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 PARNO95453 639 aaKnown RBP19.05■□□□□ 0.64
CD40-206ENST00000489304 ITGB1P05556 798 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 TUBBP07437 444 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 RNASE9P60153 205 aaKnown RBP19.05■□□□□ 0.64
CD40-206ENST00000489304 TIGD5Q53EQ6 642 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 DCUN1D2Q6PH85 259 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 FBXO38Q6PIJ6 1188 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 DSTYKQ6XUX3 929 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 STK32AQ8WU08 396 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 MCEEQ96PE7 176 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 SYNCQ9H7C4 482 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 RAB21Q9UL25 225 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 TIMP1P01033 207 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 RWDD2BP57060 319 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 DSC1Q08554 894 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 CCDC142Q17RM4 750 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 UBE2Q1Q7Z7E8 422 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 ANKRD52Q8NB46 1076 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 URGCPQ8TCY9 931 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 IPO4Q8TEX9 1081 aaKnown RBP19.05■□□□□ 0.64
CD40-206ENST00000489304 SLC35F5Q8WV83 523 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 PNKPQ96T60 521 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 NAP1L3Q99457 506 aaPredicted RBP19.05■□□□□ 0.64
CD40-206ENST00000489304 SLC4A5Q9BY07 1137 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 DNAJB4Q9UDY4 337 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 LRFN2Q9ULH4 789 aa19.05■□□□□ 0.64
CD40-206ENST00000489304 KIAA0355O15063 1070 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 B3GAT3O94766 335 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 KRT3P12035 628 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 CSF2RAP15509 400 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 LHX1P48742 406 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 ZNF252P-AS1Q0IIN9 211 aa19.04■□□□□ 0.64
CD40-206ENST00000489304 ZNF211Q13398 564 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms