RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SYBUQ9NX95 663 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 OBP2AQ9NY56 170 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 RGS17Q9UGC6 210 aaPredicted RBP5.35□□□□□ -1.55
ITGB1-214ENST00000488427 STAP2Q9UGK3 403 aa5.35□□□□□ -1.55
ITGB1-214ENST00000488427 PRSS29PA6NIE9 313 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 VPS4BO75351 444 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 HDCP19113 662 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 CXCR5P32302 372 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 SF3B3Q15393 1217 aaKnown RBP5.34□□□□□ -1.55
ITGB1-214ENST00000488427 KIAA0753Q2KHM9 967 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 CCDC181Q5TID7 509 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 RNF220Q5VTB9 566 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 ICE2Q659A1 982 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 TAF2Q6P1X5 1199 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 VWA1Q6PCB0 445 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 GRASPQ7Z6J2 395 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-214ENST00000488427 BEND2Q8NDZ0 799 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 TOR1AIP2Q8NFQ8 470 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 PLBD2Q8NHP8 589 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 ACTRT2Q8TDY3 377 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 SMCR8Q8TEV9 937 aaPredicted RBP5.34□□□□□ -1.55
ITGB1-214ENST00000488427 ATRIPQ8WXE1 791 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 NELL1Q92832 810 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 TSR2Q969E8 191 aaKnown RBP5.34□□□□□ -1.55
ITGB1-214ENST00000488427 FAM136AQ96C01 138 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 ZNF518BQ9C0D4 1074 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 OGDHLQ9ULD0 1010 aa5.34□□□□□ -1.55
ITGB1-214ENST00000488427 KIAA0556O60303 1618 aa5.34□□□□□ -1.56
ITGB1-214ENST00000488427 MAGI3Q5TCQ9 1506 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 BTN3A1O00481 513 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 PRPF3O43395 683 aaKnown RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 TLR5O60602 858 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 PPFIA2O75334 1257 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 INMTO95050 263 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 BRAFP15056 766 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 KRT17Q04695 432 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 SLC13A2Q13183 592 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 E2F2Q14209 437 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 PTPRRQ15256 657 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 RBM20Q5T481 1227 aaKnown RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 STRIP1Q5VSL9 837 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 KAZNQ674X7 775 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 TMPRSS9Q7Z410 1059 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 NSUN7Q8NE18 718 aaKnown RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 MRGPRX1Q96LB2 322 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 SLC46A1Q96NT5 459 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 PTDSS2Q9BVG9 487 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 TTYH3Q9C0H2 523 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 NUP62CLQ9H1M0 184 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 ZMAT3Q9HA38 289 aaKnown RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 ZNF287Q9HBT7 754 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 KIAA1586Q9HCI6 787 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 A1CFQ9NQ94 594 aaKnown RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 XPR1Q9UBH6 696 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 AFF4Q9UHB7 1163 aaKnown RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 DMRT1Q9Y5R6 373 aa5.33□□□□□ -1.56
ITGB1-214ENST00000488427 ZCCHC11Q5TAX3 1644 aaKnown RBP5.33□□□□□ -1.56
ITGB1-214ENST00000488427 COL4A3Q01955 1670 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 CCDC78A2IDD5 438 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 GCOM1H8Y6P7 765 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-214ENST00000488427 TPP1O14773 563 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 DNAJB5O75953 348 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 PARNO95453 639 aaKnown RBP5.32□□□□□ -1.56
ITGB1-214ENST00000488427 KITP10721 976 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 NPR1P16066 1061 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 SLC11A2P49281 568 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 ARFIP2P53365 341 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 INHBEP58166 350 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 MC2RQ01718 297 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 SCAPQ12770 1279 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 INSCQ1MX18 579 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 ZNF618Q5T7W0 954 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 TMEM108Q6UXF1 575 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 C11orf96Q7Z7L8 435 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 C14orf80Q86SX3 495 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 CCAR1Q8IX12 1150 aaKnown RBP5.32□□□□□ -1.56
ITGB1-214ENST00000488427 DNAJC5GQ8N7S2 189 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 IL31RAQ8NI17 732 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 SLC30A5Q8TAD4 765 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 ANKS1AQ92625 1134 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 DUSP26Q9BV47 211 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 ACTRT3Q9BYD9 372 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 DPH1Q9BZG8 443 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 ZCWPW1Q9H0M4 648 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 KLC4Q9NSK0 619 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 EHD3Q9NZN3 535 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 C11orf21Q9P2W6 132 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 INSL6Q9Y581 213 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 EPN1Q9Y6I3 576 aaPredicted RBP5.32□□□□□ -1.56
ITGB1-214ENST00000488427 ARAP3Q8WWN8 1544 aa5.32□□□□□ -1.56
ITGB1-214ENST00000488427 FHAD1B1AJZ9 1412 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 UHRF1BP1Q6BDS2 1440 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 A0A087WWL8 130 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 ONECUT2O95948 504 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 MYBP10242 640 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 RHCEP18577 417 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 CHRM3P20309 590 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 GATA3P23771 443 aa5.31□□□□□ -1.56
ITGB1-214ENST00000488427 KLRC1P26715 233 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms