RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 INPP5FQ9Y2H2 1132 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 FNDC1Q4ZHG4 1894 aaPredicted RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 PATJQ8NI35 1801 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 TULP2O00295 520 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 PSTPIP1O43586 416 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 PQBP1O60828 265 aaKnown RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 CAPN15O75808 1086 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 FGGP02679 453 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 COL6A1P12109 1028 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 CCDC130P13994 396 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 PAX3P23760 479 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 TKTP29401 623 aaKnown RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 RPL34P49207 117 aaKnown RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 RWDD2BP57060 319 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 RNASE9P60153 205 aaKnown RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 DSC1Q08554 894 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 ZNF211Q13398 564 aaPredicted RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 CLUL1Q15846 466 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 TIGD5Q53EQ6 642 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 PMF1Q6P1K2 205 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 WDR93Q6P2C0 686 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 GLB1LQ6UWU2 654 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 SLC39A5Q6ZMH5 540 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 ANKRD52Q8NB46 1076 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 B3GALNT2Q8NCR0 500 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 IPO4Q8TEX9 1081 aaKnown RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 DNAI2Q9GZS0 605 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 SYNCQ9H7C4 482 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 RNF216Q9NWF9 866 aaPredicted RBP9.97□□□□□ -0.81
SF3B1-211ENST00000487698 HESX1Q9UBX0 185 aa9.97□□□□□ -0.81
SF3B1-211ENST00000487698 VWA8A3KMH1 1905 aa9.96□□□□□ -0.81
SF3B1-211ENST00000487698 CCDC151A5D8V7 595 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 E5RJQ4 531 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 GOLGA8SH3BPF8 625 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 CCDC188H7C350 402 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 M0QZQ0 153 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 B4GALT3O60512 393 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 GABBR2O75899 941 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 CYP11A1P05108 521 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 TUBBP07437 444 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 PYGMP11217 842 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 KRT3P12035 628 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 RFC1P35251 1148 aaPredicted RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 LHX1P48742 406 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 CLCN6P51797 869 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 BCAT1P54687 386 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 TAS2R40P59535 323 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 PDE4CQ08493 712 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 BST2Q10589 180 aaKnown RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 PIGHQ14442 188 aaPredicted RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 TCTN1Q2MV58 587 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 GLE1Q53GS7 698 aaKnown RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 KIAA0319Q5VV43 1072 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 DAB2IPQ5VWQ8 1189 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 AADACL2Q6P093 401 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 DCUN1D2Q6PH85 259 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 CTU1Q7Z7A3 348 aaKnown RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 TMEM110Q86TL2 294 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 DNAJC5GQ8N7S2 189 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 DBF4BQ8NFT6 615 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 JOSD2Q8TAC2 188 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 SPATA18Q8TC71 538 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 RUBCNQ92622 972 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 TOX2Q96NM4 488 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 NAP1L3Q99457 506 aaPredicted RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 HNRNPABQ99729 332 aaKnown RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 LRRC1Q9BTT6 524 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 MIS12Q9H081 205 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 ELAC1Q9H777 363 aaKnown RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 TMEM161AQ9NX61 479 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 LTBP2Q14767 1821 aa9.96□□□□□ -0.82
SF3B1-211ENST00000487698 KIAA0100Q14667 2235 aaKnown RBP9.96□□□□□ -0.82
SF3B1-211ENST00000487698 CXCL10P02778 98 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 PTPN1P18031 435 aaKnown RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 IBSPP21815 317 aaPredicted RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 VSNL1P62760 191 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 RBM10P98175 930 aaKnown RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 FAAP100Q0VG06 881 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 BRD3Q15059 726 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 CCDC142Q17RM4 750 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 NOMO2Q5JPE7 1267 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 C8orf74Q6P047 294 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 FBXO46Q6PJ61 603 aaPredicted RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 OLFML1Q6UWY5 402 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 FAM183BPQ6ZVS7 135 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 RHOT1Q8IXI2 618 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 KATNAL2Q8IYT4 538 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 FUKQ8N0W3 1084 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 CRIPAKQ8N1N5 446 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 SLC2A14Q8TDB8 520 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 APBB2Q92870 758 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ARMC5Q96C12 935 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 PIWIL1Q96J94 861 aaKnown RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 AP1M1Q9BXS5 423 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 CRTAC1Q9NQ79 661 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 CYLDQ9NQC7 956 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 METTL5Q9NRN9 209 aaKnown RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ARGLU1Q9NWB6 273 aaPredicted RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 DDX43Q9NXZ2 648 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms