RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 VCPP55072 806 aaKnown RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 TRADDQ15628 312 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 DUPD1Q68J44 220 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 PGM2Q96G03 612 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 ECT2Q9H8V3 914 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 CCT8L1PA6NM43 557 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 NKRFO15226 690 aaKnown RBP eCLIP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 ARFIP2P53365 341 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 EFHC1Q5JVL4 640 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 SPOUT1Q5T280 376 aaKnown RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 FAM84AQ96KN4 292 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 GMLQ99445 158 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 VTA1Q9NP79 307 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 PPARGC1AQ9UBK2 798 aaKnown RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 BCAP29Q9UHQ4 241 aa12.36□□□□□ -0.43
TRA2B-214ENST00000487615 ABT1Q9ULW3 272 aaKnown RBP12.36□□□□□ -0.43
TRA2B-214ENST00000487615 PPFIA2O75334 1257 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 HAUS5O94927 633 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 PAEPP09466 180 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 CDH8P55286 799 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 GEMIN4P57678 1058 aaKnown RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 MAMLD1Q13495 774 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 PLEKHH3Q7Z736 793 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 SCN4BQ8IWT1 228 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 PCDH9Q9HC56 1237 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 KLC4Q9NSK0 619 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 ITGA11Q9UKX5 1188 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 BARX2Q9UMQ3 279 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 POLIQ9UNA4 740 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 STRNO43815 780 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 SESN2P58004 480 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 NOMO3P69849 1222 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 PTK7Q13308 1070 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 PTK6Q13882 451 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF268Q14587 947 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 MFSD14CQ5VZR4 134 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 ITPRIPL1Q6GPH6 555 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 STRCQ7RTU9 1775 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 HELQQ8TDG4 1101 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 CCDC68Q9H2F9 335 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 DONSONQ9NYP3 566 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 A0A0B4J269 797 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF189O75820 626 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 SERPINB6P35237 376 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 KPNA2P52292 529 aaKnown RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 ARPP19P56211 112 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 TPI1P60174 286 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 SEPT6Q14141 434 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 MAP3K21Q5TCX8 1036 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 FBXW10Q5XX13 1052 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 RXFP2Q8WXD0 754 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 CDCA5Q96FF9 252 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 VPS11Q9H270 941 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 LRRC19Q9H756 370 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 SLC38A7Q9NVC3 462 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 SHOC2Q9UQ13 582 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 DDX3YO15523 660 aaKnown RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 FARP2O94887 1054 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 PDK2Q15119 407 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 DCAF6Q58WW2 860 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF572Q7Z3I7 529 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 FBXO41Q8TF61 875 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 EPAS1Q99814 870 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 ALG13Q9NP73 1137 aaKnown RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 KLK14Q9P0G3 267 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 AJAP1Q9UKB5 411 aaPredicted RBP12.35□□□□□ -0.43
TRA2B-214ENST00000487615 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 BTAF1O14981 1849 aa12.35□□□□□ -0.43
TRA2B-214ENST00000487615 LACTBL1A8MY62 500 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 CTSHP09668 335 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 HOXD13P35453 343 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 CPT1AP50416 773 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 PPIL2Q13356 520 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 AMHR2Q16671 573 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 TRIM68Q6AZZ1 485 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 C4orf22Q6V702 233 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 COPS5Q92905 334 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 ACO2Q99798 780 aaKnown RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 ZFATQ9P243 1243 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 ZNF214Q9UL59 606 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 F8VP50 259 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 DNALI1O14645 258 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 DHX15O43143 795 aaKnown RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 BAG2O95816 211 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 ADORA2AP29274 412 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 TNFSF9P41273 254 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 NDST1P52848 882 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 DEUP1Q05D60 604 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 GRIK4Q16099 956 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 TAF1BQ53T94 588 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 SLFN11Q7Z7L1 901 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 PHF13Q86YI8 300 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 PGBD4Q96DM1 585 aa12.34□□□□□ -0.43
TRA2B-214ENST00000487615 NTPCRQ9BSD7 190 aaKnown RBP12.34□□□□□ -0.43
TRA2B-214ENST00000487615 DDX23Q9BUQ8 820 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms