RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 FRMD8P1Q9BZ68 369 aaPredicted RBP27.47■■□□□ 1.99
HLA-C-208ENST00000487245 PHACTR1Q9C0D0 580 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 VRTNQ9H8Y1 702 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 IFT122Q9HBG6 1241 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 SIX4Q9UIU6 781 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 MCM3APO60318 1980 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 LACTBL1A8MY62 500 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 PI4K2BG5E9Z4 385 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 LGALS2P05162 132 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 KRT10P13645 584 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 STX2P32856 288 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 ELF3P78545 371 aaPredicted RBP27.47■■□□□ 1.99
HLA-C-208ENST00000487245 OGDHQ02218 1023 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 TFDP3Q5H9I0 405 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 NUGGCQ68CJ6 796 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 SPATA21Q7Z572 469 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 LINC01465Q8N7H1 131 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 CCDC63Q8NA47 563 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 ZNF668Q96K58 619 aaPredicted RBP27.47■■□□□ 1.99
HLA-C-208ENST00000487245 FHDC1Q9C0D6 1143 aaPredicted RBP27.47■■□□□ 1.99
HLA-C-208ENST00000487245 FAM124BQ9H5Z6 455 aaPredicted RBP27.47■■□□□ 1.99
HLA-C-208ENST00000487245 ABCF3Q9NUQ8 709 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 SHOC2Q9UQ13 582 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 ZNF148Q9UQR1 794 aa27.47■■□□□ 1.99
HLA-C-208ENST00000487245 TCF4P15884 667 aa27.46■■□□□ 1.99
HLA-C-208ENST00000487245 DPY19L2Q6NUT2 758 aa27.46■■□□□ 1.99
HLA-C-208ENST00000487245 C1orf127Q8N9H9 656 aa27.46■■□□□ 1.99
HLA-C-208ENST00000487245 PCDH9Q9HC56 1237 aa27.46■■□□□ 1.99
HLA-C-208ENST00000487245 SAYSD1Q9NPB0 183 aa27.46■■□□□ 1.99
HLA-C-208ENST00000487245 RBM47A0AV96 593 aaKnown RBP27.45■■□□□ 1.99
HLA-C-208ENST00000487245 ATF7P17544 494 aaPredicted RBP27.45■■□□□ 1.99
HLA-C-208ENST00000487245 CDKN2BP42772 138 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 ARSEP51690 589 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 RAD23BP54727 409 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 RIPK1Q13546 671 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 ZNF268Q14587 947 aaPredicted RBP27.45■■□□□ 1.99
HLA-C-208ENST00000487245 HADHQ16836 314 aaKnown RBP27.45■■□□□ 1.99
HLA-C-208ENST00000487245 ZNF792Q3KQV3 632 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 WDR72Q3MJ13 1102 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 KAZNQ674X7 775 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 TRABD2AQ86V40 505 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 GPRC5AQ8NFJ5 357 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 EMID1Q96A84 441 aaPredicted RBP27.45■■□□□ 1.99
HLA-C-208ENST00000487245 L3MBTL3Q96JM7 780 aaPredicted RBP27.45■■□□□ 1.99
HLA-C-208ENST00000487245 TGS1Q96RS0 853 aaKnown RBP27.45■■□□□ 1.99
HLA-C-208ENST00000487245 SENP1Q9P0U3 644 aa27.45■■□□□ 1.99
HLA-C-208ENST00000487245 ZSWIM8A7E2V4 1837 aa27.45■■□□□ 1.98
HLA-C-208ENST00000487245 ALOX15BO15296 676 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 KRT7P08729 469 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 KRT3P12035 628 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 GCAP28676 217 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 IGBP1P78318 339 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 AMHR2Q16671 573 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 LDLRAD1Q5T700 205 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 RNASEH2BQ5TBB1 312 aaKnown RBP27.44■■□□□ 1.98
HLA-C-208ENST00000487245 TAPT1Q6NXT6 567 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 SRRM1Q8IYB3 904 aaKnown RBP27.44■■□□□ 1.98
HLA-C-208ENST00000487245 PPTC7Q8NI37 304 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 KLHL11Q9NVR0 708 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 FAM47DPA6NHR8 397 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 PRPF4O43172 522 aaKnown RBP eCLIP27.44■■□□□ 1.98
HLA-C-208ENST00000487245 NFICP08651 508 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 PSMA2P25787 234 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 ACVR2BQ13705 512 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 PTPN20Q4JDL3 420 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 CYP4A22Q5TCH4 519 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 JADE1Q6IE81 842 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 PRUNE1Q86TP1 453 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 CDR2LQ86X02 465 aaPredicted RBP27.44■■□□□ 1.98
HLA-C-208ENST00000487245 TMEM192Q8IY95 271 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 TTC39CQ8N584 583 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 GLIS1Q8NBF1 620 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 SLC35B2Q8TB61 432 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 YY1AP1Q9H869 796 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 SPON1Q9HCB6 807 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 CD248Q9HCU0 757 aa27.44■■□□□ 1.98
HLA-C-208ENST00000487245 A0A087WZ62 844 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 UBOX5O94941 541 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 IQCF3P0C7M6 154 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 PSMC1P62191 440 aaKnown RBP27.43■■□□□ 1.98
HLA-C-208ENST00000487245 IL9RQ01113 521 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 MTFR1Q15390 333 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 RNF43Q68DV7 783 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 CCDC91Q7Z6B0 441 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 FAM228AQ86W67 206 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 FDXACB1Q9BRP7 624 aaPredicted RBP27.43■■□□□ 1.98
HLA-C-208ENST00000487245 PDZD7Q9H5P4 517 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 EVPLQ92817 2033 aa27.43■■□□□ 1.98
HLA-C-208ENST00000487245 EXOC1LA0A1B0GW35 172 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 FOXO6A8MYZ6 492 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 RASA4BC9J798 803 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 RASA4O43374 803 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 PECAM1P16284 738 aaPredicted RBP27.42■■□□□ 1.98
HLA-C-208ENST00000487245 TAC1P20366 129 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 EPHX2P34913 555 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 PTPN11Q06124 597 aaPredicted RBP27.42■■□□□ 1.98
HLA-C-208ENST00000487245 BNIP1Q12981 228 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 GPS1Q13098 491 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 ACAP1Q15027 740 aa27.42■■□□□ 1.98
HLA-C-208ENST00000487245 PREPLQ4J6C6 727 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms