RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 SLC8A3P57103 927 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 PSMC1P62191 440 aaKnown RBP7.45□□□□□ -1.22
SF3A3-206ENST00000487062 ORC1Q13415 861 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 TUSC3Q13454 348 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 MAMLD1Q13495 774 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 PIGHQ14442 188 aaPredicted RBP7.45□□□□□ -1.22
SF3A3-206ENST00000487062 MTFR1Q15390 333 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 PPP2R5EQ16537 467 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 PTPROQ16827 1216 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 GOLGA7BQ2TAP0 167 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 GLE1Q53GS7 698 aaKnown RBP7.45□□□□□ -1.22
SF3A3-206ENST00000487062 TRAF7Q6Q0C0 670 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 GLB1LQ6UWU2 654 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 LIMS2Q7Z4I7 341 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 MTERF4Q7Z6M4 381 aaKnown RBP7.45□□□□□ -1.22
SF3A3-206ENST00000487062 METTL23Q86XA0 190 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 RASGEF1CQ8N431 466 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 WDTC1Q8N5D0 677 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 SPATA4Q8NEY3 305 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 SPATA18Q8TC71 538 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 TSC1Q92574 1164 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 SEPT8Q92599 483 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 RUBCNQ92622 972 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 APBB2Q92870 758 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 SENP8Q96LD8 212 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.45□□□□□ -1.22
SF3A3-206ENST00000487062 RNF19AQ9NV58 838 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 TSPAN16Q9UKR8 245 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 TTC7AQ9ULT0 858 aaPredicted RBP7.45□□□□□ -1.22
SF3A3-206ENST00000487062 L1RE1Q9UN81 338 aa7.45□□□□□ -1.22
SF3A3-206ENST00000487062 GOLGA6L10A0A0M3HER8 536 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 TARSL2A2RTX5 802 aaKnown RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 TMEM191CA6NGB0 347 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 CASTOR2A6NHX0 329 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 SIGLEC16A6NMB1 481 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 INPPL1O15357 1258 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 PSTPIP1O43586 416 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 ERLIN1O75477 346 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 POMCP01189 267 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 PDGFRBP09619 1106 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 RHOXF2BP0C7M4 288 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 ODC1P11926 461 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 KRT3P12035 628 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 CAPN2P17655 700 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 GPD2P43304 727 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 GABRB2P47870 512 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 CLCNKBP51801 687 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 BCAT1P54687 386 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 FAM189BP81408 668 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 C2orf54Q08AI8 447 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 BST2Q10589 180 aaKnown RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 PDCLQ13371 301 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 LONRF2Q1L5Z9 754 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 PTPN20Q4JDL3 420 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 C2CD6Q53TS8 623 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 C6orf132Q5T0Z8 1188 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 PPP1R26Q5T8A7 1209 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 C8orf74Q6P047 294 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 FBXO46Q6PJ61 603 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 SLC39A5Q6ZMH5 540 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 CTU1Q7Z7A3 348 aaKnown RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 PHLDB2Q86SQ0 1253 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 ZNF598Q86UK7 904 aaKnown RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 RHOT1Q8IXI2 618 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 NOA1Q8NC60 698 aaKnown RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 GSTCDQ8NEC7 633 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 STK32AQ8WU08 396 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 KBTBD7Q8WVZ9 684 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 MAIP1Q8WWC4 291 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 CD101Q93033 1021 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 MS4A14Q96JA4 679 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 BTBD6Q96KE9 485 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 RNPC3Q96LT9 517 aaKnown RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 TOX2Q96NM4 488 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 MCEEQ96PE7 176 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 FAM193BQ96PV7 902 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 RHOXF2Q9BQY4 288 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 OSBPL7Q9BZF2 842 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 ELAC1Q9H777 363 aaKnown RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 CYLDQ9NQC7 956 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 ST7Q9NRC1 585 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 FAM49BQ9NUQ9 324 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 TMEM161AQ9NX61 479 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 MIOSQ9NXC5 875 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 CHORDC1Q9UHD1 332 aaPredicted RBP7.44□□□□□ -1.22
SF3A3-206ENST00000487062 DSEQ9UL01 958 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 INPP5FQ9Y2H2 1132 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 PCDHA3Q9Y5H8 950 aa7.44□□□□□ -1.22
SF3A3-206ENST00000487062 TSC2P49815 1807 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 TCRBV5S1A1TA0A578 114 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 GOLGA8SH3BPF8 625 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 KRIT1O00522 736 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 GABRDO14764 452 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 HOXA2O43364 376 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
SF3A3-206ENST00000487062 FGGP02679 453 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 FGFR1P11362 822 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PTPN1P18031 435 aaKnown RBP7.43□□□□□ -1.22
SF3A3-206ENST00000487062 PCSK1P29120 753 aa7.43□□□□□ -1.22
SF3A3-206ENST00000487062 ADORA2BP29275 332 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms