RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
PRKCB-207ENST00000486868 CPXM1Q96SM3 734 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 GAD1Q99259 594 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 HNRNPABQ99729 332 aaKnown RBP12.28□□□□□ -0.44
PRKCB-207ENST00000486868 ADAM2Q99965 735 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 FUT8Q9BYC5 575 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 PAK6Q9NQU5 681 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-207ENST00000486868 OGFRQ9NZT2 677 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 FEZ2Q9UHY8 353 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-207ENST00000486868 CYTH4Q9UIA0 394 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
PRKCB-207ENST00000486868 TRIP12Q14669 1992 aaPredicted RBP12.28□□□□□ -0.44
PRKCB-207ENST00000486868 PODXLO00592 558 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 CYB561D2O14569 222 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 RAD51CO43502 376 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 MGEA5O60502 916 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 PARNO95453 639 aaKnown RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 KRT7P08729 469 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 PCK1P35558 622 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 MLH1P40692 756 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 EPHB4P54760 987 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 RPL7AP62424 266 aaKnown RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 BST2Q10589 180 aaKnown RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 HADHQ16836 314 aaKnown RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 GOLGA7BQ2TAP0 167 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 PPP1R26Q5T8A7 1209 aaPredicted RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 SYDE1Q6ZW31 735 aaPredicted RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 SLC24A5Q71RS6 500 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 AENQ8WTP8 325 aaKnown RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 CAVIN3Q969G5 261 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 PKNOX2Q96KN3 472 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 MCEEQ96PE7 176 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 TRIM7Q9C029 511 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 RAB17Q9H0T7 212 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 ELAC1Q9H777 363 aaKnown RBP12.27□□□□□ -0.45
PRKCB-207ENST00000486868 SYNCQ9H7C4 482 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 DSEQ9UL01 958 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 OGDHLQ9ULD0 1010 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 PTPN22Q9Y2R2 807 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 TRIM17Q9Y577 477 aa12.27□□□□□ -0.45
PRKCB-207ENST00000486868 C9IYK1 514 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 DPYSL4O14531 572 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 HEXIM1O94992 359 aaKnown RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 MYCNP04198 464 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 CYP11A1P05108 521 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 GLI1P08151 1106 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 SELPP16109 830 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 CAPN2P17655 700 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 DESP17661 470 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 PLA2G4AP47712 749 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 MARCKSL1P49006 195 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 ZNF143P52747 638 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 RNASE9P60153 205 aaKnown RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 PLCB3Q01970 1234 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 ZNF252P-AS1Q0IIN9 211 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 ZNF211Q13398 564 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 TUSC3Q13454 348 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 SIX1Q15475 284 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 PTPROQ16827 1216 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 UPP1Q16831 310 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 C2CD6Q53TS8 623 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 ACOT1Q86TX2 421 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 VSIG1Q86XK7 387 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 TMEM130Q8N3G9 435 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 PRELID2Q8N945 189 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 HDAC7Q8WUI4 952 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 APBB2Q92870 758 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 SENP8Q96LD8 212 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 ZFP42Q96MM3 310 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 AP1M1Q9BXS5 423 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 FRMD8P1Q9BZ68 369 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 UBXN6Q9BZV1 441 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 ACBD3Q9H3P7 528 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 FAM114A2Q9NRY5 505 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 RNF216Q9NWF9 866 aaPredicted RBP12.26□□□□□ -0.45
PRKCB-207ENST00000486868 ASNSD1Q9NWL6 643 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 MIOSQ9NXC5 875 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 KANSL3Q9P2N6 904 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 RASAL2Q9UJF2 1139 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 NME7Q9Y5B8 376 aa12.26□□□□□ -0.45
PRKCB-207ENST00000486868 TMEM189-UBE2V1I3L0A0 370 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 XPO1O14980 1071 aaKnown RBP12.25□□□□□ -0.45
PRKCB-207ENST00000486868 FGFR1P11362 822 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 TYMPP19971 482 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 PSMA2P25787 234 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 PCSK1P29120 753 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 SSTR3P32745 418 aaPredicted RBP12.25□□□□□ -0.45
PRKCB-207ENST00000486868 RFC1P35251 1148 aaPredicted RBP12.25□□□□□ -0.45
PRKCB-207ENST00000486868 SCNN1GP51170 649 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 SLC8A3P57103 927 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 TAS2R40P59535 323 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 SLC6A3Q01959 620 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 OGDHQ02218 1023 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 KLF1Q13351 362 aaPredicted RBP12.25□□□□□ -0.45
PRKCB-207ENST00000486868 CYP4A22Q5TCH4 519 aa12.25□□□□□ -0.45
PRKCB-207ENST00000486868 LLGL2Q6P1M3 1020 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms