RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 TARDBPQ13148 414 aaKnown RBP eCLIP5.98□□□□□ -1.45
COPS3-209ENST00000486810 MTM1Q13496 603 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 SNX1Q13596 522 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 IL10RAQ13651 578 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 Q4G0T1 1027 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 ISM2Q6H9L7 571 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 MTHFD1LQ6UB35 978 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 FAM180AQ6UWF9 173 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 TADA2BQ86TJ2 420 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 APPL2Q8NEU8 664 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 OR10H5Q8NGA6 315 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 CCHCR1Q8TD31 782 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 UROC1Q96N76 676 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 OSBPL9Q96SU4 736 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 RUFY1Q96T51 708 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 OSBPL10Q9BXB5 764 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 TEX101Q9BY14 249 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 UBXN6Q9BZV1 441 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 SENP6Q9GZR1 1112 aaPredicted RBP5.98□□□□□ -1.45
COPS3-209ENST00000486810 SYNCQ9H7C4 482 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 SPON1Q9HCB6 807 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 TCF7L2Q9NQB0 619 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 GPRC5BQ9NZH0 403 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 SORCS3Q9UPU3 1222 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 ZNF510Q9Y2H8 683 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 NOSIPQ9Y314 301 aaKnown RBP5.98□□□□□ -1.45
COPS3-209ENST00000486810 TMED5Q9Y3A6 229 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 SPEF1Q9Y4P9 236 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 PCDHA13Q9Y5I0 950 aa5.98□□□□□ -1.45
COPS3-209ENST00000486810 TMEM94Q12767 1356 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 SMTNL1A8MU46 457 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 NPIPB8E9PQR5 432 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 KIF3BO15066 747 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 CHUKO15111 745 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 PJA2O43164 708 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 NARSO43776 548 aaKnown RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 TBCAO75347 108 aaKnown RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 ZNF189O75820 626 aaPredicted RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 FGFR1OPO95684 399 aaKnown RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 FOSP01100 380 aaPredicted RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 RPSAP08865 295 aaKnown RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 RRM1P23921 792 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 GCKP35557 465 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 CLRN1P58418 232 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 FAM189BP81408 668 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 KIF23Q02241 960 aaPredicted RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 PPP2R5BQ15173 497 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 LSM12Q3MHD2 195 aaKnown RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 LRRC23Q53EV4 343 aaPredicted RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 SMUG1Q53HV7 270 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 SH2D4BQ5SQS7 431 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 OTUD7BQ6GQQ9 843 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 ATF7IPQ6VMQ6 1270 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 PNMA8AQ86V59 439 aaPredicted RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 CEP57Q86XR8 500 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 DZIP1Q86YF9 867 aaKnown RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 APLFQ8IW19 511 aaPredicted RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 RNF168Q8IYW5 571 aaPredicted RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 TTC39CQ8N584 583 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 DCBLD1Q8N8Z6 715 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 MAGEC3Q8TD91 643 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 TRPC4APQ8TEL6 797 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 ANKRD49Q8WVL7 239 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 USP6NLQ92738 828 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 TFAP2CQ92754 450 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 PPP2R3CQ969Q6 453 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 SNX21Q969T3 373 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 RBM41Q96IZ5 413 aaKnown RBP5.97□□□□□ -1.45
COPS3-209ENST00000486810 CCDC114Q96M63 670 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 DMRTA2Q96SC8 542 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 MRI1Q9BV20 369 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 KIF9Q9HAQ2 790 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 TMEM165Q9HC07 324 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 SLC2A4RGQ9NR83 387 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 PARPBPQ9NWS1 579 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 UBAP1Q9NZ09 502 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 CHST2Q9Y4C5 530 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 GMEB1Q9Y692 573 aa5.97□□□□□ -1.45
COPS3-209ENST00000486810 ROCK2O75116 1388 aaKnown RBP5.96□□□□□ -1.45
COPS3-209ENST00000486810 RPAP1Q9BWH6 1393 aaPredicted RBP5.96□□□□□ -1.45
COPS3-209ENST00000486810 CCDC154A6NI56 674 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 ZNF185O15231 689 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 ATP6V1G1O75348 118 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 S100BP04271 92 aaPredicted RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 IL2RBP14784 551 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 BTF3P20290 206 aaKnown RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 CD9P21926 228 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 MCM3P25205 808 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 MATR3P43243 847 aaKnown RBP eCLIP5.96□□□□□ -1.46
COPS3-209ENST00000486810 RANBP1P43487 201 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 ARPC4P59998 168 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 TUBA1BP68363 451 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 PHEXP78562 749 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 ROR2Q01974 943 aaKnown RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 NHLH2Q02577 135 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 BTG3Q14201 252 aaPredicted RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 RASA2Q15283 850 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 TAF11Q15544 211 aa5.96□□□□□ -1.46
COPS3-209ENST00000486810 FAM102AQ5T9C2 384 aaPredicted RBP5.96□□□□□ -1.46
COPS3-209ENST00000486810 NUGGCQ68CJ6 796 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms