RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 STKLD1Q8NE28 680 aa24.04■■□□□ 1.44
SREBF1-214ENST00000486311 FOXD4L4Q8WXT5 416 aaPredicted RBP24.04■■□□□ 1.44
SREBF1-214ENST00000486311 MRPS31Q92665 395 aaKnown RBP24.04■■□□□ 1.44
SREBF1-214ENST00000486311 USP13Q92995 863 aaPredicted RBP24.04■■□□□ 1.44
SREBF1-214ENST00000486311 RMDN1Q96DB5 314 aa24.04■■□□□ 1.44
SREBF1-214ENST00000486311 TRMT2BQ96GJ1 504 aaKnown RBP24.04■■□□□ 1.44
SREBF1-214ENST00000486311 FUBP3Q96I24 572 aaKnown RBP eCLIP24.04■■□□□ 1.44
SREBF1-214ENST00000486311 MYRFLQ96LU7 910 aa24.04■■□□□ 1.44
SREBF1-214ENST00000486311 FAM83CQ9BQN1 747 aa24.04■■□□□ 1.44
SREBF1-214ENST00000486311 KIF9Q9HAQ2 790 aa24.04■■□□□ 1.44
SREBF1-214ENST00000486311 AGPAT3Q9NRZ7 376 aa24.04■■□□□ 1.44
SREBF1-214ENST00000486311 UXTQ9UBK9 157 aaPredicted RBP24.04■■□□□ 1.44
SREBF1-214ENST00000486311 CCL26Q9Y258 94 aa24.04■■□□□ 1.44
SREBF1-214ENST00000486311 HCRTO43612 131 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 PAPSS2O95340 614 aaPredicted RBP24.03■■□□□ 1.44
SREBF1-214ENST00000486311 ZSCAN22P10073 491 aaPredicted RBP24.03■■□□□ 1.44
SREBF1-214ENST00000486311 EHHADHQ08426 723 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 TXNDC8Q6A555 127 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 FAM171BQ6P995 826 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 UNC13DQ70J99 1090 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 SPATA2LQ8IUW3 424 aaPredicted RBP24.03■■□□□ 1.44
SREBF1-214ENST00000486311 KBTBD7Q8WVZ9 684 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 GKN1Q9NS71 199 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 TDP1Q9NUW8 608 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 UBE4BO95155 1302 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 CACNA1AO00555 2505 aa24.03■■□□□ 1.44
SREBF1-214ENST00000486311 POLR2DO15514 142 aaKnown RBP24.02■■□□□ 1.44
SREBF1-214ENST00000486311 TADA3O75528 432 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 F13A1P00488 732 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 MAGEA11P43364 429 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 SNRPFP62306 86 aaKnown RBP24.02■■□□□ 1.44
SREBF1-214ENST00000486311 CCINQ13939 588 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 ZNF268Q14587 947 aaPredicted RBP24.02■■□□□ 1.44
SREBF1-214ENST00000486311 PON2Q15165 354 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 SNRNP35Q16560 246 aaKnown RBP24.02■■□□□ 1.44
SREBF1-214ENST00000486311 Q6ZS52 159 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 HSCBQ8IWL3 235 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 SYNPOQ8N3V7 929 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 SCFD1Q8WVM8 642 aa24.02■■□□□ 1.44
SREBF1-214ENST00000486311 SECISBP2LQ93073 1101 aaKnown RBP24.02■■□□□ 1.44
SREBF1-214ENST00000486311 NUP210Q8TEM1 1887 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-214ENST00000486311 FOXD4L6Q3SYB3 417 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-214ENST00000486311 FOXD4L3Q6VB84 417 aaPredicted RBP24.01■■□□□ 1.43
SREBF1-214ENST00000486311 TRAPPC11Q7Z392 1133 aa24.01■■□□□ 1.43
SREBF1-214ENST00000486311 GPR161Q8N6U8 529 aaKnown RBP24.01■■□□□ 1.43
SREBF1-214ENST00000486311 SYT15Q9BQS2 421 aa24.01■■□□□ 1.43
SREBF1-214ENST00000486311 HPS4Q9NQG7 708 aa24.01■■□□□ 1.43
SREBF1-214ENST00000486311 CDH9Q9ULB4 789 aa24.01■■□□□ 1.43
SREBF1-214ENST00000486311 PCDHA7Q9UN72 937 aa24.01■■□□□ 1.43
SREBF1-214ENST00000486311 DNAH14Q0VDD8 3507 aa24.01■■□□□ 1.43
SREBF1-214ENST00000486311 ATP2C2O75185 946 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 WARSP23381 471 aaKnown RBP24■■□□□ 1.43
SREBF1-214ENST00000486311 LMO2P25791 158 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 RUNX3Q13761 415 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 PSMD6Q15008 389 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 ATL3Q6DD88 541 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 C4orf50Q6ZRC1 276 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 NELFCDQ8IXH7 590 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 XXYLT1Q8NBI6 393 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 RDH13Q8NBN7 331 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 FAM13BQ9NYF5 915 aa24■■□□□ 1.43
SREBF1-214ENST00000486311 CEP250Q9BV73 2442 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 PVALEFA0A1B0GWK0 134 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 K7ESF4 209 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 CLIC2O15247 247 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 DLATP10515 647 aaKnown RBP23.99■■□□□ 1.43
SREBF1-214ENST00000486311 CASP1P29466 404 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 ME1P48163 572 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 CYP2J2P51589 502 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 PSMC1P62191 440 aaKnown RBP23.99■■□□□ 1.43
SREBF1-214ENST00000486311 CYP24A1Q07973 514 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 BMT2Q1RMZ1 405 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 RESP18Q5W5W9 173 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 HS2ST1Q7LGA3 356 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 SCN4BQ8IWT1 228 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 RIN3Q8TB24 985 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 MYLPFQ96A32 169 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 FNBP1Q96RU3 617 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 CGRRF1Q99675 332 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 BLZF1Q9H2G9 400 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 CRTAC1Q9NQ79 661 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 MAGEC2Q9UBF1 373 aaPredicted RBP23.99■■□□□ 1.43
SREBF1-214ENST00000486311 TCHHQ07283 1943 aa23.99■■□□□ 1.43
SREBF1-214ENST00000486311 HSP90AA1P07900 732 aaKnown RBP23.98■■□□□ 1.43
SREBF1-214ENST00000486311 TNNI1P19237 187 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 FAM160A1Q05DH4 1040 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 MAPRE1Q15691 268 aaKnown RBP23.98■■□□□ 1.43
SREBF1-214ENST00000486311 TRIM68Q6AZZ1 485 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 CC2D1AQ6P1N0 951 aaPredicted RBP23.98■■□□□ 1.43
SREBF1-214ENST00000486311 VSTM1Q6UX27 236 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 CCDC127Q96BQ5 260 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 SPATA17Q96L03 361 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 CEP295NLQ96MC4 621 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 MMS19Q96T76 1030 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 EBF3Q9H4W6 596 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 DLL3Q9NYJ7 618 aa23.98■■□□□ 1.43
SREBF1-214ENST00000486311 CGNQ9P2M7 1197 aaKnown RBP23.98■■□□□ 1.43
SREBF1-214ENST00000486311 OTOL1A6NHN0 477 aaPredicted RBP23.97■■□□□ 1.43
SREBF1-214ENST00000486311 CST3P01034 146 aaPredicted RBP23.97■■□□□ 1.43
SREBF1-214ENST00000486311 FAM163BP0C2L3 166 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms