RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 PCDHB13Q9Y5F0 798 aa21.84■■□□□ 1.09
CHRD-215ENST00000485883 SNX9Q9Y5X1 595 aa21.84■■□□□ 1.09
CHRD-215ENST00000485883 SDK1Q7Z5N4 2213 aa21.84■■□□□ 1.09
CHRD-215ENST00000485883 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.83■■□□□ 1.09
CHRD-215ENST00000485883 HUS1O60921 280 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 LDHAP00338 332 aaKnown RBP21.83■■□□□ 1.09
CHRD-215ENST00000485883 DDX6P26196 483 aaKnown RBP eCLIP21.83■■□□□ 1.09
CHRD-215ENST00000485883 HOXA6P31267 233 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 STAT6P42226 847 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 CCDC73Q6ZRK6 1079 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 PRR23CQ6ZRP0 262 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 CEP68Q76N32 757 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 WDR5BQ86VZ2 330 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 LRRC52Q8N7C0 313 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 GLIS3Q8NEA6 775 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 CACTINQ8WUQ7 758 aaKnown RBP21.83■■□□□ 1.09
CHRD-215ENST00000485883 SLC22A12Q96S37 553 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 GDAP2Q9NXN4 497 aa21.83■■□□□ 1.09
CHRD-215ENST00000485883 ATG2BQ96BY7 2078 aa21.83■■□□□ 1.08
CHRD-215ENST00000485883 DENND4CQ5VZ89 1909 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 TRDMT1O14717 391 aaKnown RBP21.82■■□□□ 1.08
CHRD-215ENST00000485883 GDF9O60383 454 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 LRP3O75074 770 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 NOL4O94818 638 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 EGFP01133 1207 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 NASPP49321 788 aaPredicted RBP21.82■■□□□ 1.08
CHRD-215ENST00000485883 MYL7Q01449 175 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 STK38Q15208 465 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 HPS3Q969F9 1004 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 CNTNAP3BQ96NU0 1288 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 CYP2S1Q96SQ9 504 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 CNTNAP3Q9BZ76 1288 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 ITGA11Q9UKX5 1188 aa21.82■■□□□ 1.08
CHRD-215ENST00000485883 PTPRJQ12913 1337 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 GABRDO14764 452 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 ATP2C2O75185 946 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 RBP5P82980 135 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 GRSF1Q12849 480 aaKnown RBP eCLIP21.81■■□□□ 1.08
CHRD-215ENST00000485883 CSRP2Q16527 193 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 SOWAHAQ2M3V2 549 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 ADGRF2Q8IZF7 708 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 TMEM86AQ8N2M4 240 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 PDILTQ8N807 584 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 TTC16Q8NEE8 873 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 OR5B17Q8NGF7 314 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 NETO1Q8TDF5 533 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 KIF9Q9HAQ2 790 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 TRPC7Q9HCX4 862 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 ABCB6Q9NP58 842 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 OBSL1O75147 1896 aa21.81■■□□□ 1.08
CHRD-215ENST00000485883 SLC30A4O14863 429 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 RNF40O75150 1001 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 ZSCAN22P10073 491 aaPredicted RBP21.8■■□□□ 1.08
CHRD-215ENST00000485883 GALK1P51570 392 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 RPL10AP62906 217 aaKnown RBP21.8■■□□□ 1.08
CHRD-215ENST00000485883 ALCAMQ13740 583 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 CCDC6Q16204 474 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 FOXD4L5Q5VV16 416 aaPredicted RBP21.8■■□□□ 1.08
CHRD-215ENST00000485883 CC2D1AQ6P1N0 951 aaPredicted RBP21.8■■□□□ 1.08
CHRD-215ENST00000485883 GPD1LQ8N335 351 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 TOP6BLQ8N6T0 577 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 FOXD4L4Q8WXT5 416 aaPredicted RBP21.8■■□□□ 1.08
CHRD-215ENST00000485883 MYRFLQ96LU7 910 aa21.8■■□□□ 1.08
CHRD-215ENST00000485883 ZNF638Q14966 1978 aaKnown RBP21.79■■□□□ 1.08
CHRD-215ENST00000485883 AXIN1O15169 862 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 TMEM191BP0C7N4 346 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 LMO2P25791 158 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 GJA4P35212 333 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 FAM160A1Q05DH4 1040 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 ZNF268Q14587 947 aaPredicted RBP21.79■■□□□ 1.08
CHRD-215ENST00000485883 MTF1Q14872 753 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 ZNF77Q15935 545 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 CFAP221Q4G0U5 840 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 FAM171BQ6P995 826 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 CBWD2Q8IUF1 395 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 SPATA2LQ8IUW3 424 aaPredicted RBP21.79■■□□□ 1.08
CHRD-215ENST00000485883 SCN4BQ8IWT1 228 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 LINC00301Q8NCQ3 95 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 TRMT2BQ96GJ1 504 aaKnown RBP21.79■■□□□ 1.08
CHRD-215ENST00000485883 TMEM206Q9H813 350 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 INTS13Q9NVM9 706 aa21.79■■□□□ 1.08
CHRD-215ENST00000485883 UXTQ9UBK9 157 aaPredicted RBP21.79■■□□□ 1.08
CHRD-215ENST00000485883 SOBPA7XYQ1 873 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 SPTLC2O15270 562 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 YEATS4O95619 227 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 F13A1P00488 732 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 HOXD13P35453 343 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 LHX1P48742 406 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 PSMC1P62191 440 aaKnown RBP21.78■■□□□ 1.08
CHRD-215ENST00000485883 PDGFRLQ15198 375 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 KBTBD6Q86V97 674 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 ARL14EPQ8N8R7 260 aaPredicted RBP21.78■■□□□ 1.08
CHRD-215ENST00000485883 SPRYD3Q8NCJ5 442 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 KBTBD7Q8WVZ9 684 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 GAB3Q8WWW8 586 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 EZH1Q92800 747 aaPredicted RBP21.78■■□□□ 1.08
CHRD-215ENST00000485883 ECT2Q9H8V3 914 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 GCNT4Q9P109 453 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 SLC8A2Q9UPR5 921 aa21.78■■□□□ 1.08
CHRD-215ENST00000485883 WNT6Q9Y6F9 365 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms