RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 SALL1Q9NSC2 1324 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 C1orf167Q5SNV9 1468 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 PKD1L3Q7Z443 1732 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 CPDO75976 1380 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ABCC12Q96J65 1359 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 RGPD2P0DJD1 1756 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 VPS37CA5D8V6 355 aaPredicted RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC69A6NI79 296 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 C22orf46C9J442 243 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 M0QX08 132 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 SUSD5O60279 629 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 KLHL41O60662 606 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 KPNA6O60684 536 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 CIAO1O76071 339 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 GJB6O95452 261 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 TNNT1P13805 278 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 CPA1P15085 419 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF20P17024 532 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 BTF3P20290 206 aaKnown RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 GRIA2P42262 883 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 PSMC4P43686 418 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 PHKA1P46020 1223 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 NPTX2P47972 431 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 KCNJ4P48050 445 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 AP2B1P63010 937 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 RBM6P78332 1123 aaKnown RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 KRTAP1-1Q07627 177 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 SEMA3AQ14563 771 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 IQCB1Q15051 598 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 OASLQ15646 514 aaKnown RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 LONRF2Q1L5Z9 754 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ANKDD1AQ495B1 522 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 MCMDC2Q4G0Z9 681 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 EPHA10Q5JZY3 1008 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 TATDN1Q6P1N9 297 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ANGPTL8Q6UXH0 198 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 DSTYKQ6XUX3 929 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 GBP6Q6ZN66 633 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 MFSD6Q6ZSS7 791 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 EP400NLQ6ZTU2 488 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 GALNTL5Q7Z4T8 443 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF589Q86UQ0 364 aaPredicted RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 STK32CQ86UX6 486 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 LRRTM3Q86VH5 581 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF227Q86WZ6 799 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 LRRC49Q8IUZ0 686 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 Q8N1X5 172 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 NECAB1Q8N987 351 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 PLBD2Q8NHP8 589 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 NPLOC4Q8TAT6 608 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ANKRD7Q92527 254 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 USP13Q92995 863 aaPredicted RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ATP2A3Q93084 1043 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF274Q96GC6 653 aaPredicted RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 PGBD1Q96JS3 809 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 CHCHD6Q9BRQ6 235 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 C1QTNF3Q9BXJ4 246 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 NAA15Q9BXJ9 866 aaKnown RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 CCDC68Q9H2F9 335 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 BOLA2Q9H3K6 86 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 TTC12Q9H892 705 aaPredicted RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 VPS37BQ9H9H4 285 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 C1orf112Q9NSG2 853 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 DONSONQ9NYP3 566 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 DDX20Q9UHI6 824 aaKnown RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 FBXL7Q9UJT9 491 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 ZHX1Q9UKY1 873 aaPredicted RBP4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 WDR19Q8NEZ3 1342 aa4.35□□□□□ -1.71
PRPF38B-205ENST00000485810 LAMB4A4D0S4 1761 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 C5P01031 1676 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ADAMTSL3P82987 1691 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 PRAMEF22A3QJZ6 481 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 H0YHG0 523 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 H7C0S8 307 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 POLR3GO15318 223 aaPredicted RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ZBTB43O43298 467 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ZBED4O75132 1171 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TSC22D2O75157 780 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 MAFO75444 373 aaPredicted RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 SNX4O95219 450 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 STAMBPO95630 424 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 APBB3O95704 486 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 HSPA4LO95757 839 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TUBB4AP04350 444 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CAPNS1P04632 268 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 SNRPB2P08579 225 aaKnown RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CYP21A2P08686 494 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 FAM153BP0C7A2 387 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 LCP1P13796 627 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 AKR1B1P15121 316 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CD9P21926 228 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 IL15P40933 162 aaPredicted RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 BCL6P41182 706 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 CD86P42081 329 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 ZNF75DP51815 510 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 INHBEP58166 350 aa4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 POLR2FP61218 127 aaKnown RBP4.34□□□□□ -1.71
PRPF38B-205ENST00000485810 TMPRSS15P98073 1019 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms