RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ASIC4Q96FT7 647 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 TNIP3Q96KP6 325 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 RPP25Q9BUL9 199 aaKnown RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 ZNF334Q9HCZ1 680 aaPredicted RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 CRTAC1Q9NQ79 661 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 UXTQ9UBK9 157 aaPredicted RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 CA14Q9ULX7 337 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 ATP8B3O60423 1300 aa13.35□□□□□ -0.27
PTCD1-205ENST00000485746 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
PTCD1-205ENST00000485746 SCN1AP35498 2009 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 PPP1R3GB7ZBB8 358 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 ECI2O75521 394 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 FGFR1OPO95684 399 aaKnown RBP13.34□□□□□ -0.27
PTCD1-205ENST00000485746 ASS1P00966 412 aaKnown RBP13.34□□□□□ -0.27
PTCD1-205ENST00000485746 CYP4F8P98187 520 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 PAK1Q13153 545 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 CCDC142Q17RM4 750 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 CFAP221Q4G0U5 840 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 FAM78AQ5JUQ0 283 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 TANGO2Q6ICL3 276 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 VSTM1Q6UX27 236 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 FILIP1Q7Z7B0 1213 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 TRIML1Q8N9V2 468 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 B3GALNT2Q8NCR0 500 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 TAS1R2Q8TE23 839 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 MRPS31Q92665 395 aaKnown RBP13.34□□□□□ -0.27
PTCD1-205ENST00000485746 ELSPBP1Q96BH3 223 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 ZSWIM3Q96MP5 696 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 CEP63Q96MT8 703 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 ASB16Q96NS5 453 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 PKMYT1Q99640 499 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 LRRC3Q9BY71 257 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 DPEP3Q9H4B8 488 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 TTC28Q96AY4 2481 aa13.34□□□□□ -0.27
PTCD1-205ENST00000485746 C2orf16Q68DN1 1984 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 TRIM66O15016 1216 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 MOSPD3O75425 235 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 PDGFBP01127 241 aaPredicted RBP13.33□□□□□ -0.28
PTCD1-205ENST00000485746 MAGEA11P43364 429 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 NOP14P78316 857 aaKnown RBP13.33□□□□□ -0.28
PTCD1-205ENST00000485746 GPC5P78333 572 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 PFKPQ01813 784 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 GAREM2Q75VX8 874 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 ACOT1Q86TX2 421 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 STKLD1Q8NE28 680 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 FBXL13Q8NEE6 735 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 E2F7Q96AV8 911 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 PCED1BQ96HM7 432 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
PTCD1-205ENST00000485746 PLA2G2FQ9BZM2 168 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 SDCBP2Q9H190 292 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 TASP1Q9H6P5 420 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 BRD9Q9H8M2 597 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 CYP3A43Q9HB55 503 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 RAB20Q9NX57 234 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 WNT16Q9UBV4 365 aa13.33□□□□□ -0.28
PTCD1-205ENST00000485746 C5orf42Q9H799 3197 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 CLDN5O00501 218 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 GNA14O95837 355 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 CD58P19256 250 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 BMP6P22004 513 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 VIPR2P41587 438 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 NDST1P52848 882 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 NLRP12P59046 1061 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 CETN1Q12798 172 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 GRM2Q14416 872 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
PTCD1-205ENST00000485746 STXBP5Q5T5C0 1151 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 FRMD5Q7Z6J6 570 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 UNC93AQ86WB7 457 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 ARID3BQ8IVW6 561 aaPredicted RBP13.32□□□□□ -0.28
PTCD1-205ENST00000485746 ZC3H3Q8IXZ2 948 aaKnown RBP13.32□□□□□ -0.28
PTCD1-205ENST00000485746 MAB21L3Q8N8X9 362 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 SHDQ96IW2 340 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
PTCD1-205ENST00000485746 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 ELOVL4Q9GZR5 314 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 NIF3L1Q9GZT8 377 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 NUP62CLQ9H1M0 184 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 CLSTN2Q9H4D0 955 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 TRPC7Q9HCX4 862 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 SLC2A4RGQ9NR83 387 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 EHD2Q9NZN4 543 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 RAPGEFL1Q9UHV5 662 aa13.32□□□□□ -0.28
PTCD1-205ENST00000485746 HEPACAM2A8MVW5 462 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 F8VP50 259 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 NRG2O14511 850 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-205ENST00000485746 ZNF263O14978 683 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 NOL4O94818 638 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 PSMC3P17980 439 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
PTCD1-205ENST00000485746 GDI1P31150 447 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 AVPR1AP37288 418 aa13.31□□□□□ -0.28
PTCD1-205ENST00000485746 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
PTCD1-205ENST00000485746 ORC1Q13415 861 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms