RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 CUEDC2Q9H467 287 aa14.24□□□□□ -0.13
UBA3-210ENST00000485424 C2orf42Q9NWW7 574 aa14.24□□□□□ -0.13
UBA3-210ENST00000485424 DDX43Q9NXZ2 648 aaKnown RBP14.24□□□□□ -0.13
UBA3-210ENST00000485424 GTSE1Q9NYZ3 720 aa14.24□□□□□ -0.13
UBA3-210ENST00000485424 SNX9Q9Y5X1 595 aa14.24□□□□□ -0.13
UBA3-210ENST00000485424 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.24□□□□□ -0.13
UBA3-210ENST00000485424 ADAMTS9Q9P2N4 1935 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 DCDC2BA2VCK2 349 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 ZNF233A6NK53 670 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 LRP3O75074 770 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 PPP6R2O75170 966 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 RETP07949 1114 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 CSH1P0DML2 217 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 CSH2P0DML3 217 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 NASPP49321 788 aaPredicted RBP14.23□□□□□ -0.13
UBA3-210ENST00000485424 RPL10AP62906 217 aaKnown RBP14.23□□□□□ -0.13
UBA3-210ENST00000485424 SRSF5Q13243 272 aaKnown RBP14.23□□□□□ -0.13
UBA3-210ENST00000485424 SIM2Q14190 667 aaPredicted RBP14.23□□□□□ -0.13
UBA3-210ENST00000485424 PON2Q15165 354 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 RALGPS2Q86X27 583 aaPredicted RBP14.23□□□□□ -0.13
UBA3-210ENST00000485424 HSCBQ8IWL3 235 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 PDCL2Q8N4E4 241 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 C1orf127Q8N9H9 656 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 LINC00301Q8NCQ3 95 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 TTC8Q8TAM2 541 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 MRPS31Q92665 395 aaKnown RBP14.23□□□□□ -0.13
UBA3-210ENST00000485424 DHX58Q96C10 678 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 ACBD6Q9BR61 282 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 CBWD1Q9BRT8 395 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 PDE11AQ9HCR9 933 aa14.23□□□□□ -0.13
UBA3-210ENST00000485424 UXTQ9UBK9 157 aaPredicted RBP14.23□□□□□ -0.13
UBA3-210ENST00000485424 A0A087X0B3 334 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 HRO43593 1189 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 CUTAO60888 179 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 DDX6P26196 483 aaKnown RBP eCLIP14.22□□□□□ -0.13
UBA3-210ENST00000485424 PCSK1P29120 753 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 HOXC13P31276 330 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 LHX1P48742 406 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 TNK2Q07912 1038 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 CCINQ13939 588 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 DGKKQ5KSL6 1271 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
UBA3-210ENST00000485424 CC2D1AQ6P1N0 951 aaPredicted RBP14.22□□□□□ -0.13
UBA3-210ENST00000485424 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.22□□□□□ -0.13
UBA3-210ENST00000485424 LRRTM3Q86VH5 581 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 LONP2Q86WA8 852 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 SPATA2LQ8IUW3 424 aaPredicted RBP14.22□□□□□ -0.13
UBA3-210ENST00000485424 ADGRF2Q8IZF7 708 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 MAB21L3Q8N8X9 362 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 IQUBQ8NA54 791 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 ZSWIM2Q8NEG5 633 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 NETO1Q8TDF5 533 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
UBA3-210ENST00000485424 MTMR12Q9C0I1 747 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 IL21Q9HBE4 155 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 KIAA1586Q9HCI6 787 aa14.22□□□□□ -0.13
UBA3-210ENST00000485424 TFIP11Q9UBB9 837 aaKnown RBP14.22□□□□□ -0.13
UBA3-210ENST00000485424 CLSTN1O94985 981 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 YEATS4O95619 227 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 PDIA4P13667 645 aaKnown RBP14.21□□□□□ -0.13
UBA3-210ENST00000485424 ACAT1P24752 427 aaKnown RBP14.21□□□□□ -0.13
UBA3-210ENST00000485424 WEE1P30291 646 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 AMPD2Q01433 879 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 ITPRIPL2Q3MIP1 535 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 INTS6LQ5JSJ4 861 aaKnown RBP14.21□□□□□ -0.13
UBA3-210ENST00000485424 HEATR6Q6AI08 1181 aaKnown RBP14.21□□□□□ -0.13
UBA3-210ENST00000485424 PRR23CQ6ZRP0 262 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 SCN4BQ8IWT1 228 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 CMTM8Q8IZV2 173 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 TOP6BLQ8N6T0 577 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 FSIP1Q8NA03 581 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 SPATA18Q8TC71 538 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 LEO1Q8WVC0 666 aaPredicted RBP14.21□□□□□ -0.13
UBA3-210ENST00000485424 EXOC4Q96A65 974 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 FNBP1Q96RU3 617 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 FGFBP2Q9BYJ0 223 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 SMG9Q9H0W8 520 aaKnown RBP14.21□□□□□ -0.13
UBA3-210ENST00000485424 KIF9Q9HAQ2 790 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 SEMA4GQ9NTN9 838 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 FAM13BQ9NYF5 915 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 L1RE1Q9UN81 338 aa14.21□□□□□ -0.13
UBA3-210ENST00000485424 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.2□□□□□ -0.14
UBA3-210ENST00000485424 SLC30A4O14863 429 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
UBA3-210ENST00000485424 TNNI1P19237 187 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 CNR2P34972 360 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 WNT7BP56706 349 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 NLRP12P59046 1061 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 CSRP2Q16527 193 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 DUOXA2Q1HG44 320 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 FOXD4L6Q3SYB3 417 aaPredicted RBP14.2□□□□□ -0.14
UBA3-210ENST00000485424 LMBRD2Q68DH5 695 aaPredicted RBP14.2□□□□□ -0.14
UBA3-210ENST00000485424 FOXD4L3Q6VB84 417 aaPredicted RBP14.2□□□□□ -0.14
UBA3-210ENST00000485424 C4orf50Q6ZRC1 276 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 TTC16Q8NEE8 873 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 HPDLQ96IR7 371 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 MMS19Q96T76 1030 aa14.2□□□□□ -0.14
UBA3-210ENST00000485424 SLC46A2Q9BY10 475 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms