RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 CYP4F11Q9HBI6 524 aa11.46□□□□□ -0.57
DDX56-212ENST00000485367 HCFC1R1Q9NWW0 138 aa11.46□□□□□ -0.57
DDX56-212ENST00000485367 TIMM13Q9Y5L4 95 aaPredicted RBP11.46□□□□□ -0.57
DDX56-212ENST00000485367 A0A1W2PQC6 194 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 GOLGA6CA6NDK9 693 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 M0QZQ0 153 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 PPEF2O14830 753 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 OPA1O60313 960 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 ABLIM3O94929 683 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 GOLGA6DP0CG33 693 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 EPB41P11171 864 aaKnown RBP11.46□□□□□ -0.58
DDX56-212ENST00000485367 ADSSP30520 456 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 VCPP55072 806 aaKnown RBP11.46□□□□□ -0.58
DDX56-212ENST00000485367 KRT31Q15323 416 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 IER5LQ5T953 404 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 CCNI2Q6ZMN8 369 aaPredicted RBP11.46□□□□□ -0.58
DDX56-212ENST00000485367 B4GALNT4Q76KP1 1039 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 RTL10Q7L3V2 364 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 USP37Q86T82 979 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 ITFG1Q8TB96 612 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 PAGE5Q96GU1 130 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 FGFBP2Q9BYJ0 223 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 LRRC27Q9C0I9 530 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 KCNH6Q9H252 994 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 OLFML3Q9NRN5 406 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 GOLGA6AQ9NYA3 693 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 FBXL21Q9UKT6 434 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 DERAQ9Y315 318 aa11.46□□□□□ -0.58
DDX56-212ENST00000485367 KMT2EQ8IZD2 1858 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 NOTCH4Q99466 2003 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 A0A0U1RQJ8 604 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 FRMD3A2A2Y4 597 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 GOLGA6BA6NDN3 693 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 EIF3HO15372 352 aaKnown RBP eCLIP11.45□□□□□ -0.583e-6■□□□□ 11.2
DDX56-212ENST00000485367 NARSO43776 548 aaKnown RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 KRT86O43790 486 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 SEC24AO95486 1093 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 LRG1P02750 347 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 POU2F2P09086 479 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 CPB1P15086 417 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 AVPR2P30518 371 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 KRT9P35527 623 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 IRAK1P51617 712 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 COPB1P53618 953 aaKnown RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 YWHAHQ04917 246 aaPredicted RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 E2F4Q16254 413 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 TSR1Q2NL82 804 aaKnown RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 PABPC1LQ4VXU2 614 aaKnown RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 C9orf57Q5W0N0 161 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 TPGS2Q68CL5 300 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 CRELD2Q6UXH1 353 aaPredicted RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 ZNF572Q7Z3I7 529 aaPredicted RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 OR8K1Q8NGG5 319 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 NOC3LQ8WTT2 800 aaKnown RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 ATRIPQ8WXE1 791 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 SAAL1Q96ER3 474 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 DNAJC7Q99615 494 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 FAM213AQ9BRX8 229 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 MFSD1Q9H3U5 465 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 ASB7Q9H672 318 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 RMND1Q9NWS8 449 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 DNMT3BQ9UBC3 853 aaKnown RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 CDH7Q9ULB5 785 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 DUSP12Q9UNI6 340 aa11.45□□□□□ -0.58
DDX56-212ENST00000485367 ZFP37Q9Y6Q3 630 aaPredicted RBP11.45□□□□□ -0.58
DDX56-212ENST00000485367 CCDC189A1A4V9 331 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 ARHGEF37A1IGU5 675 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 OAZ2O95190 189 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 ATF2P15336 505 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 GGCXP38435 758 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 LILRA4P59901 499 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 SKOR1P84550 965 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 ADCY1Q08828 1119 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 HTR4Q13639 388 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 ALCAMQ13740 583 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 ALS2CLQ60I27 953 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 TCEAL8Q8IYN2 117 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 SLC44A3Q8N4M1 653 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 AENQ8WTP8 325 aaKnown RBP11.44□□□□□ -0.58
DDX56-212ENST00000485367 FGF13Q92913 245 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 HPS3Q969F9 1004 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 NXPE3Q969Y0 559 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 SENP8Q96LD8 212 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 SH3GL2Q99962 352 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 SELENOOQ9BVL4 669 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 CAPS2Q9BXY5 557 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 CUEDC2Q9H467 287 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 KBTBD4Q9NVX7 518 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 DPP3Q9NY33 737 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 SUFUQ9UMX1 484 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 MRPS23Q9Y3D9 190 aaKnown RBP11.44□□□□□ -0.58
DDX56-212ENST00000485367 C2CD2Q9Y426 696 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 FAM169AQ9Y6X4 670 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 SCN1AP35498 2009 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 GOLGA8IPA6NC78 632 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 GOLGA8JA6NMD2 632 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 ANHXE9PGG2 379 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 PIRO00625 290 aa11.44□□□□□ -0.58
DDX56-212ENST00000485367 PPP1R12AO14974 1030 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms