RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 AVPR1AP37288 418 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 PLCB2Q00722 1185 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 CSTF1Q05048 431 aaKnown RBP17.01■□□□□ 0.31
SIK3-211ENST00000485363 PSMD2Q13200 908 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 MAPRE1Q15691 268 aaKnown RBP17.01■□□□□ 0.31
SIK3-211ENST00000485363 SDHAF4Q5VUM1 108 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 C4orf50Q6ZRC1 276 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 TMEM150AQ86TG1 271 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 CMTM8Q8IZV2 173 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 ADSSL1Q8N142 457 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 ZNF687Q8N1G0 1237 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 CELF5Q8N6W0 485 aaKnown RBP17.01■□□□□ 0.31
SIK3-211ENST00000485363 KBTBD7Q8WVZ9 684 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 MRPS31Q92665 395 aaKnown RBP17.01■□□□□ 0.31
SIK3-211ENST00000485363 LRRC3BQ96PB8 259 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 SYT15Q9BQS2 421 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 IER2Q9BTL4 223 aa17.01■□□□□ 0.31
SIK3-211ENST00000485363 THG1LQ9NWX6 298 aaKnown RBP17.01■□□□□ 0.31
SIK3-211ENST00000485363 UXTQ9UBK9 157 aaPredicted RBP17.01■□□□□ 0.31
SIK3-211ENST00000485363 SLC38A8A6NNN8 435 aa17■□□□□ 0.31
SIK3-211ENST00000485363 NOL4O94818 638 aa17■□□□□ 0.31
SIK3-211ENST00000485363 MYL1P05976 194 aa17■□□□□ 0.31
SIK3-211ENST00000485363 WARSP23381 471 aaKnown RBP17■□□□□ 0.31
SIK3-211ENST00000485363 CCNE1P24864 410 aa17■□□□□ 0.31
SIK3-211ENST00000485363 LMO2P25791 158 aa17■□□□□ 0.31
SIK3-211ENST00000485363 MAGEA11P43364 429 aa17■□□□□ 0.31
SIK3-211ENST00000485363 SCN4BQ8IWT1 228 aa17■□□□□ 0.31
SIK3-211ENST00000485363 MAB21L3Q8N8X9 362 aa17■□□□□ 0.31
SIK3-211ENST00000485363 STKLD1Q8NE28 680 aa17■□□□□ 0.31
SIK3-211ENST00000485363 TRMT2BQ96GJ1 504 aaKnown RBP17■□□□□ 0.31
SIK3-211ENST00000485363 ZFYVE19Q96K21 471 aa17■□□□□ 0.31
SIK3-211ENST00000485363 SMG9Q9H0W8 520 aaKnown RBP17■□□□□ 0.31
SIK3-211ENST00000485363 CHRDQ9H2X0 955 aa17■□□□□ 0.31
SIK3-211ENST00000485363 LMAN1LQ9HAT1 526 aa17■□□□□ 0.31
SIK3-211ENST00000485363 MAGEC2Q9UBF1 373 aaPredicted RBP17■□□□□ 0.31
SIK3-211ENST00000485363 HPSEQ9Y251 543 aa17■□□□□ 0.31
SIK3-211ENST00000485363 ZDHHC9Q9Y397 364 aa17■□□□□ 0.31
SIK3-211ENST00000485363 ATP6V1DQ9Y5K8 247 aa17■□□□□ 0.31
SIK3-211ENST00000485363 ATP2C2O75185 946 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 PDGFRBP09619 1106 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 FAM163BP0C2L3 166 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 PSMC1P62191 440 aaKnown RBP16.99■□□□□ 0.31
SIK3-211ENST00000485363 TNNC1P63316 161 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 STK4Q13043 487 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 MTAPQ13126 283 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 TRPC3Q13507 836 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 CCDC142Q17RM4 750 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 KMT5BQ4FZB7 885 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 RALGPS2Q86X27 583 aaPredicted RBP16.99■□□□□ 0.31
SIK3-211ENST00000485363 KIAA0895Q8NCT3 520 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 ZNF516Q92618 1163 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 MYRFLQ96LU7 910 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 SNX25Q9H3E2 840 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 KIF9Q9HAQ2 790 aa16.99■□□□□ 0.31
SIK3-211ENST00000485363 SPECC1L-ADORA2AF8WAN1 911 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 KINO60870 393 aaKnown RBP16.98■□□□□ 0.31
SIK3-211ENST00000485363 PHACTR2O75167 634 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 TACC1O75410 805 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 STAU1O95793 577 aaKnown RBP16.98■□□□□ 0.31
SIK3-211ENST00000485363 ATICP31939 592 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 GNL1P36915 607 aaPredicted RBP16.98■□□□□ 0.31
SIK3-211ENST00000485363 SYKP43405 635 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 SOX9P48436 509 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 AP3M2P53677 418 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 CYP27A1Q02318 531 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 WDR72Q3MJ13 1102 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 TXNDC8Q6A555 127 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 VSTM1Q6UX27 236 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 MON1AQ86VX9 555 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 OR6B3Q8NGW1 331 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 TTC8Q8TAM2 541 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 MYLPFQ96A32 169 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 SYAP1Q96A49 352 aaPredicted RBP16.98■□□□□ 0.31
SIK3-211ENST00000485363 CHAMP1Q96JM3 812 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 GZF1Q9H116 711 aaPredicted RBP16.98■□□□□ 0.31
SIK3-211ENST00000485363 CRTAC1Q9NQ79 661 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 PRMT8Q9NR22 394 aaPredicted RBP16.98■□□□□ 0.31
SIK3-211ENST00000485363 TDP1Q9NUW8 608 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 GTSE1Q9NYZ3 720 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 PCDHGA2Q9Y5H1 932 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 PTPRDP23468 1912 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 GREB1Q4ZG55 1949 aa16.98■□□□□ 0.31
SIK3-211ENST00000485363 KIF26AQ9ULI4 1882 aaPredicted RBP16.97■□□□□ 0.31
SIK3-211ENST00000485363 WDR87Q6ZQQ6 2873 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 RPN1P04843 607 aaKnown RBP16.97■□□□□ 0.31
SIK3-211ENST00000485363 CHRNB1P11230 501 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 CTHP32929 405 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 MYL6P60660 151 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 LRRC32Q14392 662 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 PPP2R5DQ14738 602 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 ITPRIPL2Q3MIP1 535 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 MAMSTRQ6ZN01 415 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 SLC9A9Q8IVB4 645 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 FSIP1Q8NA03 581 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 TMEM174Q8WUU8 243 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 ATRIPQ8WXE1 791 aa16.97■□□□□ 0.31
SIK3-211ENST00000485363 USP13Q92995 863 aaPredicted RBP16.97■□□□□ 0.31
SIK3-211ENST00000485363 CCDC47Q96A33 483 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms