RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 UBQLN1Q9UMX0 589 aaKnown RBP9.66□□□□□ -0.86
COL8A1-207ENST00000483969 DERAQ9Y315 318 aa9.66□□□□□ -0.86
COL8A1-207ENST00000483969 TRIOBPQ9H2D6 2365 aa9.66□□□□□ -0.86
COL8A1-207ENST00000483969 CASTOR2A6NHX0 329 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 PRR19A6NJB7 356 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 ZNF233A6NK53 670 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 EXTL3O43909 919 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 B4GALT3O60512 393 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 GADD45BO75293 160 aaPredicted RBP9.65□□□□□ -0.86
COL8A1-207ENST00000483969 B3GAT3O94766 335 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 IL18RAPO95256 599 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 SOD2P04179 222 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 CXCL8P10145 99 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 CTSAP10619 480 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 PAX3P23760 479 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 CA8P35219 290 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 TNFSF9P41273 254 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 SURF1Q15526 300 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 NAB2Q15742 525 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 ZBTB6Q15916 424 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 ENOX2Q16206 610 aaKnown RBP9.65□□□□□ -0.86
COL8A1-207ENST00000483969 BMT2Q1RMZ1 405 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 AAK1Q2M2I8 961 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 USP41Q3LFD5 358 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 GLRA4Q5JXX5 417 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 PLPP4Q5VZY2 271 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 CLEC17AQ6ZS10 378 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 TMEM173Q86WV6 379 aaPredicted RBP9.65□□□□□ -0.86
COL8A1-207ENST00000483969 NT5DC4Q86YG4 428 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 NELFCDQ8IXH7 590 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 GPR65Q8IYL9 337 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 GPD1LQ8N335 351 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 BEST2Q8NFU1 509 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 SHKBP1Q8TBC3 707 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 CACTINQ8WUQ7 758 aaKnown RBP9.65□□□□□ -0.86
COL8A1-207ENST00000483969 SMARCE1Q969G3 411 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 ZMAT2Q96NC0 199 aaKnown RBP9.65□□□□□ -0.86
COL8A1-207ENST00000483969 GSDMAQ96QA5 445 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 FAM213AQ9BRX8 229 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 EMILIN2Q9BXX0 1053 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 CXCL16Q9H2A7 254 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 PCIF1Q9H4Z3 704 aa9.65□□□□□ -0.86
COL8A1-207ENST00000483969 MRPL17Q9NRX2 175 aaKnown RBP9.65□□□□□ -0.86
COL8A1-207ENST00000483969 SF3B1O75533 1304 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 SIP14410 1827 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 MEGF11A6BM72 1044 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 TISP43B9A030 160 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 GOLGA6L22H0YM25 854 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 TMEM189-UBE2V1I3L0A0 370 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 PDXKO00764 312 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 TGFB1I1O43294 461 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 CALUO43852 315 aaPredicted RBP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 FAM189A1O60320 539 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 CSPG5O95196 566 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 URODP06132 367 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 SRGAP2BP0DMP2 458 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 HOXD13P35453 343 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 NRIP1P48552 1158 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 CLCNKBP51801 687 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 HYAL1Q12794 435 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 ADAM15Q13444 863 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 PNOCQ13519 176 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 UPP1Q16831 310 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 ZBTB41Q5SVQ8 909 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 ALKBH2Q6NS38 261 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 FUT10Q6P4F1 479 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 PDXDC1Q6P996 788 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 CRELD2Q6UXH1 353 aaPredicted RBP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 EP400NLQ6ZTU2 488 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 RBM23Q86U06 439 aaKnown RBP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 PPFIBP1Q86W92 1011 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 C12orf56Q8IXR9 622 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 XXYLT1Q8NBI6 393 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 NOC3LQ8WTT2 800 aaKnown RBP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 BCL7CQ8WUZ0 217 aaPredicted RBP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 ATXN2LQ8WWM7 1075 aaKnown RBP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 RABGGTAQ92696 567 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 PABPC5Q96DU9 382 aaKnown RBP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 HERC2P3Q9BVR0 1158 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 ZBP1Q9H171 429 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 IKZF4Q9H2S9 585 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 CHRDQ9H2X0 955 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL8A1-207ENST00000483969 AGPAT3Q9NRZ7 376 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 CHST7Q9NS84 486 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 MARCH5Q9NX47 278 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 HSPBP1Q9NZL4 362 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 C2CD2Q9Y426 696 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 NUB1Q9Y5A7 615 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 IRAK3Q9Y616 596 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 TTC3P53804 2025 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 EVPLQ92817 2033 aa9.64□□□□□ -0.87
COL8A1-207ENST00000483969 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.63□□□□□ -0.87
COL8A1-207ENST00000483969 GOLGA8IPA6NC78 632 aa9.63□□□□□ -0.87
COL8A1-207ENST00000483969 C2orf71A6NGG8 1288 aa9.63□□□□□ -0.87
COL8A1-207ENST00000483969 GOLGA8JA6NMD2 632 aa9.63□□□□□ -0.87
COL8A1-207ENST00000483969 PODXLO00592 558 aa9.63□□□□□ -0.87
COL8A1-207ENST00000483969 PER2O15055 1255 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms