RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 RGL1Q9NZL6 768 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 IGSF9Q9P2J2 1179 aa5□□□□□ -1.61
PTCD3-214ENST00000483925 RPTORQ8N122 1335 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 A0A0A6YYJ9 748 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-214ENST00000483925 H7C0S8 307 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 OVOL3O00110 214 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 ACOT7O00154 380 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 BTN3A1O00481 513 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 AKR1B10O60218 316 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 CUTAO60888 179 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 NDST3O95803 873 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 ATICP31939 592 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 CARSP49589 748 aaKnown RBP4.99□□□□□ -1.61
PTCD3-214ENST00000483925 MEF2AQ02078 507 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-214ENST00000483925 SLC13A2Q13183 592 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 SNAPC2Q13487 334 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 RAB32Q13637 225 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 FLYWCH1Q4VC44 716 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 MAP3K21Q5TCX8 1036 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 USP17L6PQ6QN14 398 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 UNC13DQ70J99 1090 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 B4GALNT4Q76KP1 1039 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 VSIG1Q86XK7 387 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 KRT73Q86Y46 540 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 NGEFQ8N5V2 710 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 VGLL2Q8N8G2 317 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 GLIS1Q8NBF1 620 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 OR6Y1Q8NGX8 325 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 RILPL2Q969X0 211 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 WWC2-AS2Q96NR7 200 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 OSBPL6Q9BZF3 934 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 GPR63Q9BZJ6 419 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 PITHD1Q9GZP4 211 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-214ENST00000483925 ZWILCHQ9H900 591 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 NOD2Q9HC29 1040 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF212Q9UDV6 495 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 TBC1D29Q9UFV1 150 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 RGS17Q9UGC6 210 aaPredicted RBP4.99□□□□□ -1.61
PTCD3-214ENST00000483925 ADAM29Q9UKF5 820 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 TBX20Q9UMR3 447 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 TESMINQ9Y4I5 508 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 SNX5Q9Y5X3 404 aa4.99□□□□□ -1.61
PTCD3-214ENST00000483925 SMTNL1A8MU46 457 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 CLGNO14967 610 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 MUSKO15146 869 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 ASNA1O43681 348 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 MAFO75444 373 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 SGPL1O95470 568 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 SCGB1D1O95968 90 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 TK1P04183 234 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 ECHS1P30084 290 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 HOXD13P35453 343 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 KCNJ5P48544 419 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 FLT3LGP49771 235 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 CCR5P51681 352 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 COPAP53621 1224 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 SOX8P57073 446 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 AP2B1P63010 937 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 TLE1Q04724 770 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 DBPQ10586 325 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 CDC16Q13042 620 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 TARDBPQ13148 414 aaKnown RBP eCLIP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 CUL4BQ13620 913 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 HABP2Q14520 560 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 R3HDM1Q15032 1099 aaKnown RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 EMC10Q5UCC4 262 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 KIAA1614Q5VZ46 1190 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 BBS12Q6ZW61 710 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 ZNF713Q8N859 430 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 SSH3Q8TE77 659 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 TBC1D22AQ8WUA7 517 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 NSUN4Q96CB9 384 aaKnown RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 TMX3Q96JJ7 454 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 P2RX7Q99572 595 aaKnown RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 ADPGKQ9BRR6 497 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 TXLNGYQ9BZA5 131 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 PDCL3Q9H2J4 239 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 MRPL46Q9H2W6 279 aaKnown RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 TAF1DQ9H5J8 278 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 SLITRK6Q9H5Y7 841 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 MLXIPQ9HAP2 919 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 DIAPH3Q9NSV4 1193 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 UCKL1Q9NWZ5 548 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 KCMF1Q9P0J7 381 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 BTBD7Q9P203 1132 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 PI4KBQ9UBF8 816 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 ZHX1Q9UKY1 873 aaPredicted RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 SCAF8Q9UPN6 1271 aaKnown RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 MED16Q9Y2X0 877 aa4.98□□□□□ -1.61
PTCD3-214ENST00000483925 RRP7AQ9Y3A4 280 aaKnown RBP4.98□□□□□ -1.61
PTCD3-214ENST00000483925 MBD3L4A6NDZ8 208 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MBD3L3A6NE82 208 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PYCARD-AS1I3L0S3 204 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 ACTL6BO94805 426 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 SEC24DO94855 1032 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 A1BGP04217 495 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 FAHP16930 419 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PTGS1P23219 599 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 GABRB3P28472 473 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms