RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 CD101Q93033 1021 aa13.9□□□□□ -0.18
UBR4-213ENST00000483922 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
UBR4-213ENST00000483922 KCND2Q9NZV8 630 aa13.9□□□□□ -0.18
UBR4-213ENST00000483922 LARSQ9P2J5 1176 aaKnown RBP13.9□□□□□ -0.18
UBR4-213ENST00000483922 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.9□□□□□ -0.18
UBR4-213ENST00000483922 C2orf78A6NCI8 922 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 SOBPA7XYQ1 873 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 KPNA7A9QM74 516 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 TRAK2O60296 914 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 PRPF40AO75400 957 aaKnown RBP13.89□□□□□ -0.19
UBR4-213ENST00000483922 NOL4O94818 638 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 RHOBTB1O94844 696 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 OPRD1P41143 372 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 DGKEP52429 567 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
UBR4-213ENST00000483922 GRIN1Q05586 938 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 DHX8Q14562 1220 aaKnown RBP13.89□□□□□ -0.19
UBR4-213ENST00000483922 FBXO43Q4G163 708 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 TMEM92Q6UXU6 159 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 RASSF3Q86WH2 238 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 GPBP1Q86WP2 473 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 THEM5Q8N1Q8 247 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 KCTD17Q8N5Z5 321 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 USP33Q8TEY7 942 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 MYRFLQ96LU7 910 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 GCNAQ96QF7 691 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 SCNM1Q9BWG6 230 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 ADAM33Q9BZ11 813 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 ASB7Q9H672 318 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 KIF9Q9HAQ2 790 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 TMEM74BQ9NUR3 256 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 ZMYM5Q9UJ78 669 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 GTF3C4Q9UKN8 822 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 DSEQ9UL01 958 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 ODF2LQ9ULJ1 636 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 C2CD2Q9Y426 696 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 PCDHB5Q9Y5E4 795 aa13.89□□□□□ -0.19
UBR4-213ENST00000483922 SRRM3A6NNA2 597 aaPredicted RBP13.88□□□□□ -0.19
UBR4-213ENST00000483922 K7ENM7 598 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 ACAT1P24752 427 aaKnown RBP13.88□□□□□ -0.19
UBR4-213ENST00000483922 KCNA1Q09470 495 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 SMARCB1Q12824 385 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 USP4Q13107 963 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 PSMD2Q13200 908 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 MCM6Q14566 821 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 ELF2Q15723 593 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 METTL23Q86XA0 190 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
UBR4-213ENST00000483922 FAM184AQ8NB25 1140 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 OLIG1Q8TAK6 271 aa13.88□□□□□ -0.19
UBR4-213ENST00000483922 MRPS31Q92665 395 aaKnown RBP13.88□□□□□ -0.19
UBR4-213ENST00000483922 TRMT2BQ96GJ1 504 aaKnown RBP13.88□□□□□ -0.19
UBR4-213ENST00000483922 ANKRD11Q6UB99 2663 aaPredicted RBP13.87□□□□□ -0.19
UBR4-213ENST00000483922 NUP205Q92621 2012 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 H0YCG3 227 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 KHNYNO15037 678 aaKnown RBP13.87□□□□□ -0.19
UBR4-213ENST00000483922 CSH1P0DML2 217 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 CSH2P0DML3 217 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 CEACAM1P13688 526 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 CSRP1P21291 193 aaKnown RBP13.87□□□□□ -0.19
UBR4-213ENST00000483922 GBP1P32455 592 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 FAM160A1Q05DH4 1040 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 C2orf27AQ580R0 203 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 ADALQ6DHV7 355 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 CC2D1AQ6P1N0 951 aaPredicted RBP13.87□□□□□ -0.19
UBR4-213ENST00000483922 DCP1BQ8IZD4 617 aaKnown RBP13.87□□□□□ -0.19
UBR4-213ENST00000483922 CPA6Q8N4T0 437 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 CCDC33Q8N5R6 958 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 TTC16Q8NEE8 873 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 DEFB124Q8NES8 71 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 MDGA1Q8NFP4 955 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 FNBP1Q96RU3 617 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 STRA6Q9BX79 667 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 PARVGQ9HBI0 331 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 TMEM9BQ9NQ34 198 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 MBD1Q9UIS9 605 aaPredicted RBP13.87□□□□□ -0.19
UBR4-213ENST00000483922 AGO2Q9UKV8 859 aaKnown RBP13.87□□□□□ -0.19
UBR4-213ENST00000483922 CELSR3Q9NYQ7 3312 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 PTPRDP23468 1912 aa13.87□□□□□ -0.19
UBR4-213ENST00000483922 LOC400499M0QZD8 3231 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 ZNF638Q14966 1978 aaKnown RBP13.86□□□□□ -0.19
UBR4-213ENST00000483922 TAF4O00268 1085 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 ATP2C2O75185 946 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 CAPNS1P04632 268 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 SLC6A11P48066 632 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 SEC13P55735 322 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 AMPD2Q01433 879 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 KARSQ15046 597 aaKnown RBP13.86□□□□□ -0.19
UBR4-213ENST00000483922 EMC10Q5UCC4 262 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 DAB2IPQ5VWQ8 1189 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 ANO7Q6IWH7 933 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 C1orf127Q8N9H9 656 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 SH3RF2Q8TEC5 729 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 LEO1Q8WVC0 666 aaPredicted RBP13.86□□□□□ -0.19
UBR4-213ENST00000483922 RLN3Q8WXF3 142 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 ACBD6Q9BR61 282 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 TRPC7Q9HCX4 862 aa13.86□□□□□ -0.19
UBR4-213ENST00000483922 DDX43Q9NXZ2 648 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms