RNA–Protein interactions for RNA: ENST00000483311.5

ATXN2-210, Transcript of ataxin 2, humanhuman

TSL 1 (best)

Gene ATXN2, Length 4,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-210ENST00000483311 KCNH4Q9UQ05 1017 aa12.34□□□□□ -0.43
ATXN2-210ENST00000483311 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.34□□□□□ -0.43
ATXN2-210ENST00000483311 GHRP10912 638 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 SLC12A2P55011 1212 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 NUGGCQ68CJ6 796 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 MFSD7Q6UXD7 560 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 LRIG3Q6UXM1 1119 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 SPOCD1Q6ZMY3 1216 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 CDKL3Q8IVW4 592 aaPredicted RBP12.33□□□□□ -0.43
ATXN2-210ENST00000483311 PPM1NQ8N819 430 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 HASPINQ8TF76 798 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 SOCS4Q8WXH5 440 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 MTG1Q9BT17 334 aaPredicted RBP12.33□□□□□ -0.43
ATXN2-210ENST00000483311 MAF1Q9H063 256 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 SLC12A6Q9UHW9 1150 aa12.33□□□□□ -0.43
ATXN2-210ENST00000483311 APRTP07741 180 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 FAM200BP0CF97 657 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 PCSK1P29120 753 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 NOMO3P69849 1222 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 TTC31Q49AM3 519 aaPredicted RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 HES6Q96HZ4 224 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 TPX2Q9ULW0 747 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 CAPN7Q9Y6W3 813 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 GPR25O00155 361 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 ACADSBP45954 432 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 OTUD4Q01804 1114 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 DEUP1Q05D60 604 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 ATP13A4Q4VNC1 1196 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 BTBD8Q5XKL5 378 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 TRMT10CQ7L0Y3 403 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 CCDC33Q8N5R6 958 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 SLC7A14Q8TBB6 771 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 THOC1Q96FV9 657 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 MAML3Q96JK9 1138 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 ELAC2Q9BQ52 826 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 CNPY3Q9BT09 278 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 UBR3Q6ZT12 1888 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 ZBBXA8MT70 800 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 THP07101 528 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 CPB1P15086 417 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 ACO1P21399 889 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 GRIK1P39086 918 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 OR1G1P47890 313 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 RPL7AP62424 266 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 MAMLD1Q13495 774 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 BOLA3Q53S33 107 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 ATP11CQ8NB49 1132 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 AENQ8WTP8 325 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 FAM172AQ8WUF8 416 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 XPNPEP3Q9NQH7 507 aa12.33□□□□□ -0.44
ATXN2-210ENST00000483311 RRP15Q9Y3B9 282 aaKnown RBP12.33□□□□□ -0.44
ATXN2-210ENST00000483311 GPR182O15218 404 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 AP1G2O75843 785 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 MMP3P08254 477 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 EFHC1Q5JVL4 640 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 ANKRD20A3Q5VUR7 823 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 TAF2Q6P1X5 1199 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SLC39A4Q6P5W5 647 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 PID1Q7Z2X4 250 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SPATA2LQ8IUW3 424 aaPredicted RBP12.32□□□□□ -0.44
ATXN2-210ENST00000483311 ACTL9Q8TC94 416 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 CHST7Q9NS84 486 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 USP18Q9UMW8 372 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 COG5Q9UP83 839 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SUN1O94901 812 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 PAEPP09466 180 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SMPD1P17405 629 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 MAGEA4P43358 317 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 IRX4P78413 519 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 TRADDQ15628 312 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 FAM47EQ6ZV65 393 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 TMEM121Q9BTD3 319 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 PABPC3Q9H361 631 aaKnown RBP12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.443e-8■■□□□ 11.4
ATXN2-210ENST00000483311 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.32□□□□□ -0.44
ATXN2-210ENST00000483311 TADA2AO75478 443 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 POMCP01189 267 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SRGAP2BP0DMP2 458 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 ZFXP17010 805 aaPredicted RBP12.32□□□□□ -0.44
ATXN2-210ENST00000483311 MCL1Q07820 350 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 CCDC6Q16204 474 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 FAXCQ5TGI0 409 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 GABPB2Q8TAK5 448 aaPredicted RBP12.32□□□□□ -0.44
ATXN2-210ENST00000483311 CAVIN3Q969G5 261 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 RILPQ96NA2 401 aa12.32□□□□□ -0.44
ATXN2-210ENST00000483311 SPAG7O75391 227 aa12.31□□□□□ -0.44
ATXN2-210ENST00000483311 RFC1P35251 1148 aaPredicted RBP12.31□□□□□ -0.44
ATXN2-210ENST00000483311 RPL21P46778 160 aaKnown RBP12.31□□□□□ -0.44
ATXN2-210ENST00000483311 BCAT1P54687 386 aa12.31□□□□□ -0.44
ATXN2-210ENST00000483311 FAM131BQ86XD5 332 aa12.31□□□□□ -0.44
ATXN2-210ENST00000483311 DEPDC1BQ8WUY9 529 aa12.31□□□□□ -0.44
ATXN2-210ENST00000483311 ZNF516Q92618 1163 aa12.31□□□□□ -0.44
ATXN2-210ENST00000483311 GAD1Q99259 594 aa12.31□□□□□ -0.44
ATXN2-210ENST00000483311 ZBED2Q9BTP6 218 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms