RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 PRDM9Q9NQV7 894 aa13.74□□□□□ -0.21
COL21A1-209ENST00000482933 DDX43Q9NXZ2 648 aaKnown RBP13.74□□□□□ -0.21
COL21A1-209ENST00000482933 ABI2Q9NYB9 513 aaPredicted RBP13.74□□□□□ -0.21
COL21A1-209ENST00000482933 CGNQ9P2M7 1197 aaKnown RBP13.74□□□□□ -0.21
COL21A1-209ENST00000482933 ZMYM5Q9UJ78 669 aa13.74□□□□□ -0.21
COL21A1-209ENST00000482933 SNX9Q9Y5X1 595 aa13.74□□□□□ -0.21
COL21A1-209ENST00000482933 CACNA1HO95180 2353 aa13.74□□□□□ -0.21
COL21A1-209ENST00000482933 PRPF40AO75400 957 aaKnown RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 GLULP15104 373 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 VIPR2P41587 438 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 PKP1Q13835 747 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 GPR158Q5T848 1215 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 ZC3H14Q6PJT7 736 aaKnown RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 GAREM2Q75VX8 874 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 DPH6Q7L8W6 267 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 HS2ST1Q7LGA3 356 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 WDR49Q8IV35 697 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 ARID3BQ8IVW6 561 aaPredicted RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 CXorf38Q8TB03 319 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 LEO1Q8WVC0 666 aaPredicted RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 SCFD1Q8WVM8 642 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 FNBP1Q96RU3 617 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 BLZF1Q9H2G9 400 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 SEMA4AQ9H3S1 761 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 TASP1Q9H6P5 420 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 AGPAT3Q9NRZ7 376 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 OBP2AQ9NY56 170 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 SIX4Q9UIU6 781 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 L1RE1Q9UN81 338 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 USP34Q70CQ2 3546 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 MYO15AQ9UKN7 3530 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 PRR23AA6NEV1 266 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 CHADO15335 359 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 TGFB1I1O43294 461 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 LAMTOR5O43504 91 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 LRRN2O75325 713 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 ATF6P18850 670 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 CD72P21854 359 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 TARSP26639 723 aaKnown RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 PCSK1P29120 753 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 WEE1P30291 646 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 HOXD13P35453 343 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 AFMP43652 599 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 SNRNP35Q16560 246 aaKnown RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 BMT2Q1RMZ1 405 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 LMBRD2Q68DH5 695 aaPredicted RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 C1orf228Q6PIY5 440 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 NELFCDQ8IXH7 590 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 ADGRF2Q8IZF7 708 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 XXYLT1Q8NBI6 393 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 CSGALNACT1Q8TDX6 532 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 GIPC2Q8TF65 315 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 MSANTD3Q96H12 275 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 SLC39A2Q9NP94 309 aa13.73□□□□□ -0.21
COL21A1-209ENST00000482933 SPATA6Q9NWH7 488 aaPredicted RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 MTF2Q9Y483 593 aaPredicted RBP13.73□□□□□ -0.21
COL21A1-209ENST00000482933 FAM187AA6NFU0 413 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 GABRDO14764 452 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 CLIC2O15247 247 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 ZBTB24O43167 697 aaPredicted RBP13.72□□□□□ -0.21
COL21A1-209ENST00000482933 SLFN14P0C7P3 912 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 SP9P0CG40 484 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 CSH1P0DML2 217 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 CSH2P0DML3 217 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 TNNI1P19237 187 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 CASP1P29466 404 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 RPS9P46781 194 aaKnown RBP13.72□□□□□ -0.21
COL21A1-209ENST00000482933 MMP16P51512 607 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 MLLT6P55198 1093 aaPredicted RBP13.72□□□□□ -0.21
COL21A1-209ENST00000482933 RPL10AP62906 217 aaKnown RBP13.72□□□□□ -0.21
COL21A1-209ENST00000482933 KRT85P78386 507 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 FCHO2Q0JRZ9 810 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 CUL4BQ13620 913 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 STXBP5Q5T5C0 1151 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 ASCL5Q7RTU5 278 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 OR5B17Q8NGF7 314 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 GOLGA5Q8TBA6 731 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 FAM3CQ92520 227 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 CLDN23Q96B33 292 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 HPDLQ96IR7 371 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 PI4K2AQ9BTU6 479 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 ABCB6Q9NP58 842 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 TMLHEQ9NVH6 421 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 USP25Q9UHP3 1055 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 SERTAD1Q9UHV2 236 aa13.72□□□□□ -0.21
COL21A1-209ENST00000482933 SOBPA7XYQ1 873 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 DLATP10515 647 aaKnown RBP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 CMA1P23946 247 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 ACAT1P24752 427 aaKnown RBP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 DDX6P26196 483 aaKnown RBP eCLIP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 CYP2J2P51589 502 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 PSMD2Q13200 908 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 PSMD6Q15008 389 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.22
COL21A1-209ENST00000482933 SOWAHAQ2M3V2 549 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 ZNF528Q3MIS6 628 aa13.71□□□□□ -0.22
COL21A1-209ENST00000482933 ARHGAP29Q52LW3 1261 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms