RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 DTHD1Q6ZMT9 781 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 DCP1BQ8IZD4 617 aaKnown RBP18.72■□□□□ 0.59
RXRB-203ENST00000481441 KCTD17Q8N5Z5 321 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 USP33Q8TEY7 942 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 ATP2A3Q93084 1043 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 CNOT6LQ96LI5 555 aaKnown RBP18.72■□□□□ 0.59
RXRB-203ENST00000481441 EVLQ9UI08 416 aaPredicted RBP18.72■□□□□ 0.59
RXRB-203ENST00000481441 MAGED2Q9UNF1 606 aaPredicted RBP18.72■□□□□ 0.59
RXRB-203ENST00000481441 NEUROG3Q9Y4Z2 214 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 PCDHB5Q9Y5E4 795 aa18.72■□□□□ 0.59
RXRB-203ENST00000481441 GON4LQ3T8J9 2241 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 PLA2G4BP0C869 781 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 CSH1P0DML2 217 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 CSH2P0DML3 217 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 USP4Q13107 963 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 UAP1L1Q3KQV9 507 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 SDHAF4Q5VUM1 108 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 ANO7Q6IWH7 933 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 KIAA1211LQ6NV74 962 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 CCDC83Q8IWF9 413 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 SLC22A12Q96S37 553 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 CYP2S1Q96SQ9 504 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 LLPHQ9BRT6 129 aaKnown RBP18.71■□□□□ 0.59
RXRB-203ENST00000481441 PI4K2AQ9BTU6 479 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 MSTO1Q9BUK6 570 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 ASB7Q9H672 318 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 TMEM206Q9H813 350 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 LHX6Q9UPM6 363 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 C2CD2Q9Y426 696 aa18.71■□□□□ 0.59
RXRB-203ENST00000481441 HELZP42694 1942 aaKnown RBP18.71■□□□□ 0.59
RXRB-203ENST00000481441 ANTXRLA6NF34 631 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 HYAL3O43820 417 aaPredicted RBP18.7■□□□□ 0.58
RXRB-203ENST00000481441 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
RXRB-203ENST00000481441 IFNAR2P48551 515 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 DHPSP49366 369 aaPredicted RBP18.7■□□□□ 0.58
RXRB-203ENST00000481441 MDGA1Q8NFP4 955 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 CCDC26Q8TAB7 109 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 OLIG1Q8TAK6 271 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 PIGKQ92643 395 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 TRMT2BQ96GJ1 504 aaKnown RBP18.7■□□□□ 0.58
RXRB-203ENST00000481441 MYRFLQ96LU7 910 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 PLIN2Q99541 437 aa18.7■□□□□ 0.58
RXRB-203ENST00000481441 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.7■□□□□ 0.58
RXRB-203ENST00000481441 K7EQS6 105 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 NOL4O94818 638 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 USP17L7P0C7H9 530 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 SCP2P22307 547 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 LMAN2Q12907 356 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 C2orf27AQ580R0 203 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 LINC00597Q9H2U6 94 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 DPP3Q9NY33 737 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 UXTQ9UBK9 157 aaPredicted RBP18.69■□□□□ 0.58
RXRB-203ENST00000481441 ODF2LQ9ULJ1 636 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 MSRB2Q9Y3D2 182 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 PLXND1Q9Y4D7 1925 aa18.69■□□□□ 0.58
RXRB-203ENST00000481441 WDFY3Q8IZQ1 3526 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 TRAV19A0A0A6YYK7 116 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 KPNA7A9QM74 516 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 K7ENM7 598 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 CKMP06732 381 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 OPRD1P41143 372 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 ACOT2P49753 483 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 NR1H3Q13133 447 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 CRY1Q16526 586 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 NFE2Q16621 373 aaPredicted RBP18.68■□□□□ 0.58
RXRB-203ENST00000481441 DDR2Q16832 855 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 TRIM61Q5EBN2 209 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 EFCAB13Q8IY85 973 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 TTC16Q8NEE8 873 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 LEO1Q8WVC0 666 aaPredicted RBP18.68■□□□□ 0.58
RXRB-203ENST00000481441 REEP2Q9BRK0 252 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 TRPC7Q9HCX4 862 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 GCNT4Q9P109 453 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 KLK13Q9UKR3 277 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 MMP17Q9ULZ9 603 aa18.68■□□□□ 0.58
RXRB-203ENST00000481441 HNRNPLP14866 589 aaKnown RBP eCLIP18.67■□□□□ 0.58
RXRB-203ENST00000481441 TCF3P15923 654 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 CYP2F1P24903 491 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 SEC13P55735 322 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 RPL10AP62906 217 aaKnown RBP18.67■□□□□ 0.58
RXRB-203ENST00000481441 HMGN5P82970 282 aaKnown RBP18.67■□□□□ 0.58
RXRB-203ENST00000481441 TSPY1Q01534 308 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 GAB4Q2WGN9 574 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 TMEM119Q4V9L6 283 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 ZC2HC1CQ53FD0 456 aaPredicted RBP18.67■□□□□ 0.58
RXRB-203ENST00000481441 PIP4P1Q86T03 277 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 ARL14EPQ8N8R7 260 aaPredicted RBP18.67■□□□□ 0.58
RXRB-203ENST00000481441 SH3RF2Q8TEC5 729 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 SLC32A1Q9H598 525 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 ABCB6Q9NP58 842 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 LIMCH1Q9UPQ0 1083 aa18.67■□□□□ 0.58
RXRB-203ENST00000481441 DSPP15924 2871 aaKnown RBP18.66■□□□□ 0.58
RXRB-203ENST00000481441 ADAMTS9Q9P2N4 1935 aa18.66■□□□□ 0.58
RXRB-203ENST00000481441 DMXL2Q8TDJ6 3036 aa18.66■□□□□ 0.58
RXRB-203ENST00000481441 ANKRD63C9JTQ0 380 aa18.66■□□□□ 0.58
RXRB-203ENST00000481441 TNFRSF10BO14763 440 aa18.66■□□□□ 0.58
RXRB-203ENST00000481441 P2RY2P41231 377 aa18.66■□□□□ 0.58
RXRB-203ENST00000481441 ZNF131P52739 623 aa18.66■□□□□ 0.58
RXRB-203ENST00000481441 ATP2C1P98194 919 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms