RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 PTPN1P18031 435 aaKnown RBP8.71□□□□□ -1.01
LSM5-210ENST00000480956 MALP21145 153 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 TCF7P36402 384 aaPredicted RBP8.71□□□□□ -1.01
LSM5-210ENST00000480956 BUD31P41223 144 aaPredicted RBP8.71□□□□□ -1.01
LSM5-210ENST00000480956 DDR1Q08345 913 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 TMTC4Q5T4D3 741 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 KCTD1Q719H9 257 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 RSPH3Q86UC2 560 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 SCN4BQ8IWT1 228 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 GALNT4Q8N4A0 578 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 AOPEPQ8N6M6 819 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 UHMK1Q8TAS1 419 aaKnown RBP8.71□□□□□ -1.01
LSM5-210ENST00000480956 PTCHD1Q96NR3 888 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 APOL6Q9BWW8 343 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 PCDHAC1Q9H158 963 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 CALCOCO1Q9P1Z2 691 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 ZNF624Q9P2J8 865 aaPredicted RBP8.71□□□□□ -1.01
LSM5-210ENST00000480956 DKK3Q9UBP4 350 aa8.71□□□□□ -1.01
LSM5-210ENST00000480956 HOOK1Q9UJC3 728 aaKnown RBP8.71□□□□□ -1.01
LSM5-210ENST00000480956 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.71□□□□□ -1.01
LSM5-210ENST00000480956 A0A087WZ62 844 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 FAM25EA8MYX2 175 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 PRPSAP2O60256 369 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 CCNDBP1O95273 360 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 GGPS1O95749 300 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 GLP2RO95838 553 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 C4BPAP04003 597 aaKnown RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 FTH1P19P0C7X4 201 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 ADH5P11766 374 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 FPR2P25090 351 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 HARS2P49590 506 aaKnown RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 GALK1P51570 392 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 ALDH18A1P54886 795 aaKnown RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 YWHAHQ04917 246 aaPredicted RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 RAB32Q13637 225 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 RAB39AQ14964 217 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 MAN2A1Q16706 1144 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 FAM180AQ6UWF9 173 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 GADL1Q6ZQY3 521 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 DYMQ7RTS9 669 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 POMGNT2Q8NAT1 580 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 DAGLBQ8NCG7 672 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 NFKBIDQ8NI38 313 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 ZFAND2BQ8WV99 257 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 GAB3Q8WWW8 586 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 CFHR4Q92496 578 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 FOXRED1Q96CU9 486 aaPredicted RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 SIPA1Q96FS4 1042 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 VPS39Q96JC1 886 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 GBP4Q96PP9 640 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 ATP6V0BQ99437 205 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 C1orf21Q9H246 121 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 SLC6A20Q9NP91 592 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 HEYLQ9NQ87 328 aaPredicted RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 MRPL15Q9P015 296 aaKnown RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 DAPP1Q9UN19 280 aa8.71□□□□□ -1.02
LSM5-210ENST00000480956 COA3Q9Y2R0 106 aaPredicted RBP8.71□□□□□ -1.02
LSM5-210ENST00000480956 A0A1W2PQ09 198 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 SHISA3A0PJX4 238 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 ADARB2-AS1A8MUL3 147 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 FGF10O15520 208 aaPredicted RBP8.7□□□□□ -1.02
LSM5-210ENST00000480956 ASAP2O43150 1006 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 ZBTB43O43298 467 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 KIF5CO60282 957 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 NPHS1O60500 1241 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 SNX4O95219 450 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 EPHA8P29322 1005 aaPredicted RBP8.7□□□□□ -1.02
LSM5-210ENST00000480956 KCNJ5P48544 419 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 RTP2Q5QGT7 225 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 USP17L6PQ6QN14 398 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 KANSL1Q7Z3B3 1105 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 CILP2Q8IUL8 1156 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 ZBTB44Q8NCP5 570 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 GALNT11Q8NCW6 608 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.7□□□□□ -1.022e-7■□□□□ 9.7
LSM5-210ENST00000480956 CPT1CQ8TCG5 803 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 SLC22A17Q8WUG5 538 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 STAMQ92783 540 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 CHFRQ96EP1 664 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 PGAP3Q96FM1 320 aaPredicted RBP8.7□□□□□ -1.02
LSM5-210ENST00000480956 DACH2Q96NX9 599 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 FUZQ9BT04 418 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 SLC25A18Q9H1K4 315 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 SMARCAD1Q9H4L7 1026 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 PAPOLBQ9NRJ5 636 aaKnown RBP8.7□□□□□ -1.02
LSM5-210ENST00000480956 CACNG4Q9UBN1 327 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 MED16Q9Y2X0 877 aa8.7□□□□□ -1.02
LSM5-210ENST00000480956 MYO15BQ96JP2 1530 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 FAM90A27PA6NNH2 459 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 STX16-NPEPL1H3BU86 382 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 KRIT1O00522 736 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 STX16O14662 325 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 PRLP01236 227 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 AHSGP02765 367 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 CYP2A6P11509 494 aaPredicted RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 IL1R2P27930 398 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 CIITAP33076 1130 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 ATP8B2P98198 1209 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms