RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, human

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-223	ENST00000480525	VDR	P11473	427 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	PTPN1	P18031	435 aa	Known RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ACO1	P21399	889 aa	Known RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	KCNA5	P22460	613 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	SCNN1A	P37088	669 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ALDH1A3	P47895	512 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	GUCY2F	P51841	1108 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	MFAP3	P55082	362 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	DLX2	Q07687	328 aa	Predicted RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ADCY1	Q08828	1119 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	MTA1	Q13330	715 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ZSCAN23	Q3MJ62	389 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	PKDCC	Q504Y2	493 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	PRSS36	Q5K4E3	855 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	FKBP15	Q5T1M5	1219 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	DPY19L2P1	Q6NXN4	242 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	LRSAM1	Q6UWE0	723 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	RNF19B	Q6ZMZ0	732 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	MTSS1L	Q765P7	747 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ARC	Q7LC44	396 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ZNF677	Q86XU0	584 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	TMC8	Q8IU68	726 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	SPATA2L	Q8IUW3	424 aa	Predicted RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ANKRD52	Q8NB46	1076 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	SLC7A14	Q8TBB6	771 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	WHAMM	Q8TF30	809 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	KCTD13	Q8WZ19	329 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	SMG7	Q92540	1137 aa	Known RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	SEMA4D	Q92854	862 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ACSF2	Q96CM8	615 aa	Predicted RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	MSANTD3	Q96H12	275 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	PCED1B	Q96HM7	432 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	TMEM176A	Q96HP8	235 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	CDK5RAP1	Q96SZ6	601 aa	Known RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	MMS19	Q96T76	1030 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	TRIM62	Q9BVG3	475 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	NAA15	Q9BXJ9	866 aa	Known RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ZNF518B	Q9C0D4	1074 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	NUCKS1	Q9H1E3	243 aa	Known RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	KIF9	Q9HAQ2	790 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	APOBEC3G	Q9HC16	384 aa	Known RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	DMAP1	Q9NPF5	467 aa	Predicted RBP	5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	CRTAC1	Q9NQ79	661 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ASAH2	Q9NR71	780 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	CISH	Q9NSE2	258 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	GCNT4	Q9P109	453 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	CACNG4	Q9UBN1	327 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	PCDHGC3	Q9UN70	934 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ITIH6	Q6UXX5	1313 aa		5.41	□□□□□ -1.54
HDAC6-223	ENST00000480525	ZDBF2	Q9HCK1	2354 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525		I3L4J1	428 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525		O00370	1275 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	C2CD2L	O14523	706 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	TNFRSF10B	O14763	440 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	PER2	O15055	1255 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	LINC01565	O15544	149 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ADAM12	O43184	909 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	MED7	O43513	233 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ECI2	O75521	394 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	SEC24A	O95486	1093 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	LSM8	O95777	96 aa	Known RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	TPM3	P06753	285 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ZDHHC11B	P0C7U3	371 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	CCDC172	P0C7W6	258 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	GLUL	P15104	373 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	UCHL3	P15374	230 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	HMGA1	P17096	107 aa	Known RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	NPR3	P17342	541 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ATF6	P18850	670 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	IBSP	P21815	317 aa	Predicted RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	IGFBP6	P24592	240 aa	Predicted RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	PON1	P27169	355 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ANXA13	P27216	316 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	CDH5	P33151	784 aa	Predicted RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	GTF2F1	P35269	517 aa	Known RBP eCLIP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	MTIF2	P46199	727 aa	Known RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	PLA2G4A	P47712	749 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	NDST1	P52848	882 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	NUBP1	P53384	320 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	BCAT1	P54687	386 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	RAD23B	P54727	409 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	GSC	P56915	257 aa	Predicted RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	SLC8A3	P57103	927 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	SNX16	P57768	344 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	DUSP4	Q13115	394 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	NNT	Q13423	1086 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ARID5B	Q14865	1188 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	KRT31	Q15323	416 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	NFKBIB	Q15653	356 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	CNGA2	Q16280	664 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ANO6	Q4KMQ2	910 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	SLC39A12	Q504Y0	691 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	RAB41	Q5JT25	222 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	CYP4A22	Q5TCH4	519 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	LMBRD2	Q68DH5	695 aa	Predicted RBP	5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	PM20D1	Q6GTS8	502 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	SARM1	Q6SZW1	724 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	LCLAT1	Q6UWP7	414 aa		5.4	□□□□□ -1.54
HDAC6-223	ENST00000480525	C11orf57	Q6ZUT1	292 aa	Predicted RBP	5.4	□□□□□ -1.54

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