RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 HEMGNQ9BXL5 484 aa11.15□□□□□ -0.62
SIK3-210ENST00000480468 RMI1Q9H9A7 625 aa11.15□□□□□ -0.62
SIK3-210ENST00000480468 MTMR4Q9NYA4 1195 aa11.15□□□□□ -0.62
SIK3-210ENST00000480468 MAD1L1Q9Y6D9 718 aa11.15□□□□□ -0.62
SIK3-210ENST00000480468 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 C2orf71A6NGG8 1288 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 GRIN3BO60391 1043 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 PDE5AO76074 875 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 LDHCP07864 332 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 ZNF24P17028 368 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 GLRA2P23416 452 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 MLH1P40692 756 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 ARSEP51690 589 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 NR1H2P55055 460 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 GSTM4Q03013 218 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 PPP3CAQ08209 521 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 NCOA4Q13772 614 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 KRT81Q14533 505 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 TLR1Q15399 786 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 TRIP10Q15642 601 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 HIF1AQ16665 826 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 PDCD4Q53EL6 469 aaKnown RBP11.15□□□□□ -0.63
SIK3-210ENST00000480468 SH2D5Q6ZV89 423 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 PCGF5Q86SE9 256 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 ZNF410Q86VK4 478 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 TMEM126BQ8IUX1 230 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 ERI1Q8IV48 349 aaKnown RBP11.15□□□□□ -0.63
SIK3-210ENST00000480468 MAPKAPK5Q8IW41 473 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 SLC25A41Q8N5S1 370 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 PLEKHO2Q8TD55 490 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 SNRNP27Q8WVK2 155 aaKnown RBP11.15□□□□□ -0.63
SIK3-210ENST00000480468 DDX1Q92499 740 aaKnown RBP11.15□□□□□ -0.63
SIK3-210ENST00000480468 KREMEN1Q96MU8 473 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 BIRC8Q96P09 236 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 STRA6Q9BX79 667 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 FHDC1Q9C0D6 1143 aaPredicted RBP11.15□□□□□ -0.63
SIK3-210ENST00000480468 MAF1Q9H063 256 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 PICK1Q9NRD5 415 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 SAP30BPQ9UHR5 308 aaKnown RBP11.15□□□□□ -0.63
SIK3-210ENST00000480468 VAV3Q9UKW4 847 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 AK5Q9Y6K8 562 aa11.15□□□□□ -0.63
SIK3-210ENST00000480468 IQANK1A0A1B0GTG1 560 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 TXNDC9O14530 226 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 BMP3P12645 472 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 ADRA2BP18089 450 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 POLD1P28340 1107 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 VAMP7P51809 220 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 NCKAP1LP55160 1127 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 GPS1Q13098 491 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 TFDP1Q14186 410 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 KBTBD12Q3ZCT8 623 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 ATG16L1Q676U5 607 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 TSHZ1Q6ZSZ6 1077 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 PATL1Q86TB9 770 aaKnown RBP11.14□□□□□ -0.63
SIK3-210ENST00000480468 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 FAM178BQ8IXR5 827 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 C12orf56Q8IXR9 622 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 CEP70Q8NHQ1 597 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 RAB3IL1Q8TBN0 382 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 KAT5Q92993 513 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 LENG9Q96B70 501 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 MRRFQ96E11 262 aaKnown RBP11.14□□□□□ -0.63
SIK3-210ENST00000480468 PCDH9Q9HC56 1237 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 ALG13Q9NP73 1137 aaKnown RBP11.14□□□□□ -0.63
SIK3-210ENST00000480468 PRDM11Q9NQV5 511 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 ARHGEF38Q9NXL2 777 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 KCND2Q9NZV8 630 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 C6orf203Q9P0P8 240 aaPredicted RBP11.14□□□□□ -0.63
SIK3-210ENST00000480468 TMED5Q9Y3A6 229 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 DTNAQ9Y4J8 743 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 ZNFX1Q9P2E3 1918 aaKnown RBP11.14□□□□□ -0.63
SIK3-210ENST00000480468 CDK5RAP2Q96SN8 1893 aa11.14□□□□□ -0.63
SIK3-210ENST00000480468 SFI1A8K8P3 1242 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 E5RJQ4 531 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 E7ESA3 106 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 DNAJA2O60884 412 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 ALDH2P05091 517 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 GJA8P48165 433 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 LRRC36Q1X8D7 754 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 GPATCH4Q5T3I0 446 aaKnown RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 LRRC8BQ6P9F7 803 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 PACS1Q6VY07 963 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 CAPN12Q6ZSI9 719 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 RTKN2Q8IZC4 609 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 GLIS1Q8NBF1 620 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 SLC26A7Q8TE54 656 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 PYROXD1Q8WU10 500 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 TTC17Q96AE7 1141 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 VPS50Q96JG6 964 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 FAM111AQ96PZ2 611 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 CORO1BQ9BR76 489 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 BRD8Q9H0E9 1235 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 C12orf65Q9H3J6 166 aaKnown RBP11.13□□□□□ -0.63
SIK3-210ENST00000480468 PLGRKTQ9HBL7 147 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 TUFT1Q9NNX1 390 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 GPCPD1Q9NPB8 672 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 ACP6Q9NPH0 428 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 INIPQ9NRY2 104 aa11.13□□□□□ -0.63
SIK3-210ENST00000480468 EXOC7Q9UPT5 735 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms