RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 ZAR1Q86SH2 424 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 FAM178BQ8IXR5 827 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 C12orf56Q8IXR9 622 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 SMRP1Q8NCR6 262 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 GOLGA5Q8TBA6 731 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 POF1BQ8WVV4 589 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 SUSD6Q92537 303 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 CCDC34Q96HJ3 373 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 EPSTI1Q96J88 318 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 FRMD6Q96NE9 622 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 NECTIN4Q96NY8 510 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 PPP1R10Q96QC0 940 aaKnown RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 UIMC1Q96RL1 719 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 C7orf25Q9BPX7 421 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 SH2D3AQ9BRG2 576 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 EMILIN2Q9BXX0 1053 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 TRIM9Q9C026 710 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 CEP44Q9C0F1 390 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 ZBP1Q9H171 429 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 PLEKHA4Q9H4M7 779 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 NRDE2Q9H7Z3 1164 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 UBE2ZQ9H832 354 aaPredicted RBP5.34□□□□□ -1.55
PTCD3-213ENST00000480102 KIAA1586Q9HCI6 787 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 IGSF5Q9NSI5 407 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 HSFX1Q9UBD0 423 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 TBX20Q9UMR3 447 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 EXOC7Q9UPT5 735 aa5.34□□□□□ -1.55
PTCD3-213ENST00000480102 MYH7BA7E2Y1 1941 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SF3B1O75533 1304 aaKnown RBP eCLIP5.33□□□□□ -1.564e-6■■■■■ 34.5
PTCD3-213ENST00000480102 TTC26A0AVF1 554 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 NRP1O14786 923 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SYN3O14994 580 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 OGTO15294 1046 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 GRM6O15303 877 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 B4GALT5O43286 388 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 PAGE1O75459 146 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CSDE1O75534 798 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 RECQL4O94761 1208 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 MED26O95402 600 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 MARCKSP29966 332 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 LRPAP1P30533 357 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 GNA15P30679 374 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 ADMP35318 185 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 LTBRP36941 435 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 STAT6P42226 847 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 YARSP54577 528 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 HYAL1Q12794 435 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 PSMD2Q13200 908 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SMAD4Q13485 552 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CBX2Q14781 532 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 NOLC1Q14978 699 aaKnown RBP eCLIP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SMAD2Q15796 467 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 NFIL3Q16649 462 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 L1TD1Q5T7N2 865 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SLC8B1Q6J4K2 584 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 DCLRE1AQ6PJP8 1040 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SHC4Q6S5L8 630 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 UNC13DQ70J99 1090 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 EPM2AIP1Q7L775 607 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 TRMT1LQ7Z2T5 733 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 TMCO2Q7Z6W1 182 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 GPBP1Q86WP2 473 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 KRTAP1-3Q8IUG1 177 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CCDC65Q8IXS2 484 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 THNSL1Q8IYQ7 743 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SHISA5Q8N114 240 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 TMEM87AQ8NBN3 555 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 LRRC15Q8TF66 581 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 GDPD5Q8WTR4 605 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 LEO1Q8WVC0 666 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CASP10Q92851 521 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 GATA6Q92908 595 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 FAXDC2Q96IV6 333 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SNX27Q96L92 541 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 FBXL18Q96ME1 805 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 TIGD1Q96MW7 591 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 FAM161BQ96MY7 647 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 ACAP3Q96P50 834 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 FANCD2OSQ96PS1 177 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 RPS6KC1Q96S38 1066 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 GAD1Q99259 594 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 HERC2P3Q9BVR0 1158 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CCDC94Q9BW85 323 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 COLEC11Q9BWP8 271 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 OSBPL1AQ9BXW6 950 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CDT1Q9H211 546 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 ATXN3LQ9H3M9 355 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 NXF3Q9H4D5 531 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 FAM124BQ9H5Z6 455 aaPredicted RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CACNA2D2Q9NY47 1150 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CPSF3Q9UKF6 684 aaKnown RBP5.33□□□□□ -1.56
PTCD3-213ENST00000480102 ADAM28Q9UKQ2 775 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 PCDHA7Q9UN72 937 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 FAN1Q9Y2M0 1017 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 ZDHHC9Q9Y397 364 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 BACE2Q9Y5Z0 518 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 CUL9Q8IWT3 2517 aa5.33□□□□□ -1.56
PTCD3-213ENST00000480102 SMIM28A0A1B0GU29 152 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 C2orf71A6NGG8 1288 aa5.32□□□□□ -1.56
PTCD3-213ENST00000480102 MYMKA6NI61 221 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms