RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SLC5A9Q2M3M2 681 aa21.72■■□□□ 1.07
COL13A1-208ENST00000479733 DCUN1D2Q6PH85 259 aa21.72■■□□□ 1.07
COL13A1-208ENST00000479733 AGBL1Q96MI9 1066 aa21.72■■□□□ 1.07
COL13A1-208ENST00000479733 COL20A1Q9P218 1284 aa21.72■■□□□ 1.07
COL13A1-208ENST00000479733 PTK7Q13308 1070 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 PRKD1Q15139 912 aaPredicted RBP21.71■■□□□ 1.07
COL13A1-208ENST00000479733 KCNT1Q5JUK3 1230 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 PLEKHA7Q6IQ23 1121 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 LDHDQ86WU2 507 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 ABRAQ8N0Z2 381 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 SHKBP1Q8TBC3 707 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 TMC2Q8TDI7 906 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 ACSS3Q9H6R3 686 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 PDP2Q9P2J9 529 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 AGTPBP1Q9UPW5 1226 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 ACOT2P49753 483 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 RTP1P59025 263 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 CSRNP1Q96S65 589 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 ASCC2Q9H1I8 757 aaPredicted RBP21.71■■□□□ 1.07
COL13A1-208ENST00000479733 PARVAQ9NVD7 372 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 IP6K2Q9UHH9 426 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 ANGPTL2Q9UKU9 493 aa21.71■■□□□ 1.07
COL13A1-208ENST00000479733 FAM155BO75949 473 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 BPIFB4P59827 614 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 BASP1P80723 227 aaKnown RBP21.7■■□□□ 1.06
COL13A1-208ENST00000479733 PDCD2Q16342 344 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-208ENST00000479733 CNPY1Q3B7I2 92 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 C1orf146Q5VVC0 180 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ARHGAP22Q7Z5H3 698 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 USP37Q86T82 979 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 MAP4K3Q8IVH8 894 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 SCUBE1Q8IWY4 988 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ARHGAP24Q8N264 748 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 PANX3Q96QZ0 392 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 UBE2OQ9C0C9 1292 aaKnown RBP21.7■■□□□ 1.06
COL13A1-208ENST00000479733 OCEL1Q9H607 264 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ZWILCHQ9H900 591 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 PCDH9Q9HC56 1237 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 HOMER2Q9NSB8 354 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 SCINQ9Y6U3 715 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ASTN2O75129 1339 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-208ENST00000479733 hCG_1818297A0A087WSY0 165 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 DNAJC6O75061 913 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 OGDHQ02218 1023 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 DSG1Q02413 1049 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ZNF252P-AS1Q0IIN9 211 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 KLHL38Q2WGJ6 581 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ZNF394Q53GI3 561 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ENOSF1Q7L5Y1 443 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 IGDCC3Q8IVU1 814 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ARID3BQ8IVW6 561 aaPredicted RBP21.7■■□□□ 1.06
COL13A1-208ENST00000479733 SP8Q8IXZ3 490 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 GPD1LQ8N335 351 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 ACTL9Q8TC94 416 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 SSU72Q9NP77 194 aaKnown RBP21.7■■□□□ 1.06
COL13A1-208ENST00000479733 PPM1HQ9ULR3 514 aa21.7■■□□□ 1.06
COL13A1-208ENST00000479733 TMEM63AO94886 807 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 ALDH18A1P54886 795 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 AOC3Q16853 763 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 TFDP3Q5H9I0 405 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 SCARA3Q6AZY7 606 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 ZNF677Q86XU0 584 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 TMEM174Q8WUU8 243 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 NDE1Q9NXR1 346 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 IRF6O14896 467 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 OTUD4Q01804 1114 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 KRT72Q14CN4 511 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 PPIL6Q8IXY8 311 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 SMC1BQ8NDV3 1235 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 IQCGQ9H095 443 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 XPO7Q9UIA9 1087 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 DRG1Q9Y295 367 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 CIB2O75838 187 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 BRD2P25440 801 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 KBTBD12Q3ZCT8 623 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 TDRD10Q5VZ19 366 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 CDHR3Q6ZTQ4 885 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 RSAD2Q8WXG1 361 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 ECSITQ9BQ95 431 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 MMADHCQ9H3L0 296 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 ST6GALNAC4Q9H4F1 302 aa21.69■■□□□ 1.06
COL13A1-208ENST00000479733 APOBEC3GQ9HC16 384 aaKnown RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 FARP1Q9Y4F1 1045 aaPredicted RBP21.69■■□□□ 1.06
COL13A1-208ENST00000479733 MEI4A8MW99 385 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 A8MXQ7 604 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 NFIBO00712 420 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 RPL22P35268 128 aaKnown RBP21.68■■□□□ 1.06
COL13A1-208ENST00000479733 YWHAGP61981 247 aaKnown RBP eCLIP21.68■■□□□ 1.06
COL13A1-208ENST00000479733 PRPF39Q86UA1 669 aaKnown RBP21.68■■□□□ 1.06
COL13A1-208ENST00000479733 ACAP3Q96P50 834 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 SLC13A1Q9BZW2 595 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 SNCAIPQ9Y6H5 919 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 DCAF8L1A6NGE4 600 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 INHBAP08476 426 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 MYCLP12524 364 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-208ENST00000479733 ETV4P43268 484 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 MTMR1Q13613 665 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 TKFCQ3LXA3 575 aa21.68■■□□□ 1.06
COL13A1-208ENST00000479733 DRICH1Q6PGQ1 229 aaPredicted RBP21.68■■□□□ 1.06
COL13A1-208ENST00000479733 TMPRSS6Q8IU80 811 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms