RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 TADA3O75528 432 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 NOL4O94818 638 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 NFATC1O95644 943 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 PLA2G4BP0C869 781 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 BCKDHBP21953 392 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 DPP6P42658 865 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 ATRXP46100 2492 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 SLC12A3P55017 1021 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 RPL10AP62906 217 aaKnown RBP17.34■□□□□ 0.37
DDX56-210ENST00000479440 EML3Q32P44 896 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 TRIM61Q5EBN2 209 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 WSCD1Q658N2 575 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 LRRTM3Q86VH5 581 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 CCDC83Q8IWF9 413 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 TRMT2BQ96GJ1 504 aaKnown RBP17.34■□□□□ 0.37
DDX56-210ENST00000479440 PI4K2AQ9BTU6 479 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 MMP17Q9ULZ9 603 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 MSRB2Q9Y3D2 182 aa17.34■□□□□ 0.37
DDX56-210ENST00000479440 MYH11P35749 1972 aa17.33■□□□□ 0.37
DDX56-210ENST00000479440 HYAL3O43820 417 aaPredicted RBP17.33■□□□□ 0.36
DDX56-210ENST00000479440 GPR15P49685 360 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 SEC13P55735 322 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 IRX4P78413 519 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 LPCAT2Q7L5N7 544 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 FSIP1Q8NA03 581 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 STKLD1Q8NE28 680 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 MDGA1Q8NFP4 955 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 USP33Q8TEY7 942 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 ABCB6Q9NP58 842 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 ASPMQ8IZT6 3477 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 SDK1Q7Z5N4 2213 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 SPEGQ15772 3267 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 MYO16Q9Y6X6 1858 aa17.33■□□□□ 0.36
DDX56-210ENST00000479440 DENND4CQ5VZ89 1909 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 NPHP3-ACAD11A0A0J9YXS1 232 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 KPNA7A9QM74 516 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 FAM13AO94988 1023 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 RDXP35241 583 aaKnown RBP17.32■□□□□ 0.36
DDX56-210ENST00000479440 PNPLA4P41247 253 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 MAPK8P45983 427 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 PDE6CP51160 858 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 KCNB1Q14721 858 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 CRY1Q16526 586 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 IL17AQ16552 155 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 TTC30AQ86WT1 665 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 EFCAB13Q8IY85 973 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 SH3RF2Q8TEC5 729 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 WHAMMQ8TF30 809 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 PNMA5Q96PV4 448 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 DPP3Q9NY33 737 aa17.32■□□□□ 0.36
DDX56-210ENST00000479440 H0Y626 953 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 TNFRSF10BO14763 440 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 TRIM16O95361 564 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 TCF3P15923 654 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 ENGP17813 658 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 TOB1P50616 345 aaPredicted RBP17.31■□□□□ 0.36
DDX56-210ENST00000479440 C2orf27AQ580R0 203 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 SDHAF4Q5VUM1 108 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 OLIG1Q8TAK6 271 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 MYRFLQ96LU7 910 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 PLIN2Q99541 437 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 REEP2Q9BRK0 252 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 PARVGQ9HBI0 331 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
DDX56-210ENST00000479440 TMLHEQ9NVH6 421 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
DDX56-210ENST00000479440 LIMCH1Q9UPQ0 1083 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 NUP205Q92621 2012 aa17.31■□□□□ 0.36
DDX56-210ENST00000479440 UPK3BL1B0FP48 263 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 UPK3BL2E5RIL1 263 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 MAP3K13O43283 966 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 HOXD12P35452 270 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 P2RY2P41231 377 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 ACOT2P49753 483 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 ATXN3P54252 364 aaPredicted RBP17.3■□□□□ 0.36
DDX56-210ENST00000479440 SIM1P81133 766 aaPredicted RBP17.3■□□□□ 0.36
DDX56-210ENST00000479440 MRPS21P82921 87 aaKnown RBP17.3■□□□□ 0.36
DDX56-210ENST00000479440 MYL7Q01449 175 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 POU5F1Q01860 360 aaKnown RBP17.3■□□□□ 0.36
DDX56-210ENST00000479440 DDR2Q16832 855 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 HSF5Q4G112 596 aaPredicted RBP17.3■□□□□ 0.36
DDX56-210ENST00000479440 TMEM119Q4V9L6 283 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 SPDYCQ5MJ68 293 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 ADALQ6DHV7 355 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 SLC39A4Q6P5W5 647 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 NT5DC4Q86YG4 428 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 SYT12Q8IV01 421 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 HDDC3Q8N4P3 179 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 MYCT1Q8N699 235 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 POLMQ9NP87 494 aaPredicted RBP17.3■□□□□ 0.36
DDX56-210ENST00000479440 KLK13Q9UKR3 277 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 ARHGAP26Q9UNA1 814 aa17.3■□□□□ 0.36
DDX56-210ENST00000479440 ZNF638Q14966 1978 aaKnown RBP17.29■□□□□ 0.36
DDX56-210ENST00000479440 TCHHQ07283 1943 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 ANK1P16157 1881 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 K7EQS6 105 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 TRAK2O60296 914 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 OPRD1P41143 372 aa17.29■□□□□ 0.36
DDX56-210ENST00000479440 BYSLQ13895 437 aaKnown RBP17.29■□□□□ 0.36
DDX56-210ENST00000479440 ARSHQ5FYA8 562 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms