RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 TTC27Q6P3X3 843 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 AAGABQ6PD74 315 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 ADAT2Q7Z6V5 191 aaKnown RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 SATL1Q86VE3 508 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 PDSS2Q86YH6 399 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 CCDC105Q8IYK2 499 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 MORC4Q8TE76 937 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 DQX1Q8TE96 717 aaKnown RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 CHURC1Q8WUH1 139 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 ZFRQ96KR1 1074 aaKnown RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 PRICKLE1Q96MT3 831 aaPredicted RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 OSBPL8Q9BZF1 889 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 AAASQ9NRG9 546 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 ANKFY1Q9P2R3 1169 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 PCDHA6Q9UN73 950 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 STX8Q9UNK0 236 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 PCDHA8Q9Y5H6 950 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 ABHD2P08910 425 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 HARSP12081 509 aaKnown RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 COL6A1P12109 1028 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 GTF2H1P32780 548 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 CETN2P41208 172 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 JAM2P57087 298 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 KCNH2Q12809 1159 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 HABP4Q5JVS0 413 aaKnown RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 DPY19L2P1Q6NXN4 242 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 RELL1Q8IUW5 271 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 BLOC1S4Q9NUP1 217 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 CLIC5Q9NZA1 410 aa13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 MKI67P46013 3256 aaKnown RBP13.81□□□□□ -0.2
CNKSR3-204ENST00000479339 KANSL1LA0AUZ9 987 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 CCDC162PA2VCL2 907 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 MAN1A1P33908 653 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 PGM1P36871 562 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 GRIA2P42262 883 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 NT5C2P49902 561 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 STAT2P52630 851 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 CHN2P52757 468 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 TCEAL1Q15170 157 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 INF2Q27J81 1249 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 BORAQ6PGQ7 559 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 KRT25Q7Z3Z0 450 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 SLC15A3Q8IY34 581 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 SYT2Q8N9I0 419 aaPredicted RBP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 CCDC110Q8TBZ0 833 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 CDK5RAP3Q96JB5 506 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 TCHPQ9BT92 498 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 RAVER2Q9HCJ3 691 aaKnown RBP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 UTP6Q9NYH9 597 aaKnown RBP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 R3HDM2Q9Y2K5 976 aaKnown RBP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 RIPK3Q9Y572 518 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 E9PBE3 544 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 VILLO15195 856 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 PDE5AO76074 875 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 PGK2P07205 417 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 RARBP10826 455 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 ESRRAP11474 423 aaPredicted RBP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 GALK1P51570 392 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 GRB10Q13322 594 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 ZNF211Q13398 564 aaPredicted RBP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 OTOAQ7RTW8 1153 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 TRABD2AQ86V40 505 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 TDRPQ86YL5 185 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 CYP4X1Q8N118 509 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 BBS5Q8N3I7 341 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 CHST13Q8NET6 341 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 SNRNP27Q8WVK2 155 aaKnown RBP13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 MAML1Q92585 1016 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 ALG3Q92685 438 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 RAD54LQ92698 747 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 ITPKCQ96DU7 683 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 SNF8Q96H20 258 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 PPCSQ9HAB8 311 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 USP29Q9HBJ7 922 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 SLCO1B3Q9NPD5 702 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 OSGEPQ9NPF4 335 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 INIPQ9NRY2 104 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 ARL8BQ9NVJ2 186 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 ARHGEF38Q9NXL2 777 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 NINJ2Q9NZG7 142 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 TRAF3IP3Q9Y228 551 aa13.8□□□□□ -0.2
CNKSR3-204ENST00000479339 DNAJC25-GNG10A0A024R161 153 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 HTR3EA5X5Y0 456 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 TMEM110-MUSTN1A8MSY1 372 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 ADAMTS3O15072 1205 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 SEPT4O43236 478 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 SPAG7O75391 227 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 ACTR3P61158 418 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 IRX4P78413 519 aa13.79□□□□□ -0.2
CNKSR3-204ENST00000479339 KCTD19Q17RG1 926 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms