RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 SPOPLQ6IQ16 392 aa20.07■□□□□ 0.8
SREBF1-212ENST00000478616 PAQR9Q6ZVX9 377 aa20.07■□□□□ 0.8
SREBF1-212ENST00000478616 ARID3BQ8IVW6 561 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-212ENST00000478616 ATXN3LQ9H3M9 355 aa20.07■□□□□ 0.8
SREBF1-212ENST00000478616 APOBEC3GQ9HC16 384 aaKnown RBP20.07■□□□□ 0.8
SREBF1-212ENST00000478616 ZFP14Q9HCL3 533 aa20.07■□□□□ 0.8
SREBF1-212ENST00000478616 NXF1Q9UBU9 619 aaKnown RBP20.07■□□□□ 0.8
SREBF1-212ENST00000478616 CIZ1Q9ULV3 898 aaPredicted RBP20.07■□□□□ 0.8
SREBF1-212ENST00000478616 HEPACAM2A8MVW5 462 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 ASS1P00966 412 aaKnown RBP20.06■□□□□ 0.8
SREBF1-212ENST00000478616 FAM163BP0C2L3 166 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 CD72P21854 359 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 PCSK1P29120 753 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 MAGEA11P43364 429 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 USP46P62068 366 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 MLF2Q15773 248 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-212ENST00000478616 ZNF658Q5TYW1 1059 aaPredicted RBP20.06■□□□□ 0.8
SREBF1-212ENST00000478616 USP34Q70CQ2 3546 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 ITIH5Q86UX2 942 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 MYCBPAPQ8TBZ2 947 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 FAM122AQ96E09 287 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 FUBP3Q96I24 572 aaKnown RBP eCLIP20.06■□□□□ 0.8
SREBF1-212ENST00000478616 MYRFLQ96LU7 910 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 MMS19Q96T76 1030 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 SMG9Q9H0W8 520 aaKnown RBP20.06■□□□□ 0.8
SREBF1-212ENST00000478616 MFSD1Q9H3U5 465 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 HMGXB4Q9UGU5 601 aa20.06■□□□□ 0.8
SREBF1-212ENST00000478616 MYH10P35580 1976 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 TRIM49BA6NDI0 452 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 SLC38A8A6NNN8 435 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 IKBKBO14920 756 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 BDNFP23560 247 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 WEE1P30291 646 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 GNL1P36915 607 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-212ENST00000478616 ASPAP45381 313 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 VAMP7P51809 220 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 AP3M2P53677 418 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 ADAM9Q13443 819 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 BIRC3Q13489 604 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 TRPC3Q13507 836 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 EDRF1Q3B7T1 1238 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 MDH1BQ5I0G3 518 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 WDR44Q5JSH3 913 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 GPR158Q5T848 1215 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 MFSD6LQ8IWD5 586 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 ELOA2Q8IYF1 753 aaPredicted RBP20.05■□□□□ 0.8
SREBF1-212ENST00000478616 CCDC105Q8IYK2 499 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 ADSSL1Q8N142 457 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 FAM200AQ8TCP9 573 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 TAS1R2Q8TE23 839 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 GSDMAQ96QA5 445 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 B3GNT5Q9BYG0 378 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 TASP1Q9H6P5 420 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 HEBP1Q9NRV9 189 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 MAN1B1Q9UKM7 699 aa20.05■□□□□ 0.8
SREBF1-212ENST00000478616 HLA-DRAP01903 254 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 PSMC3P17980 439 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 PTPN1P18031 435 aaKnown RBP20.04■□□□□ 0.8
SREBF1-212ENST00000478616 GCLMP48507 274 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 FCHO2Q0JRZ9 810 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 ZNF699Q32M78 642 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 ANKRD40Q6AI12 368 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 SCARA5Q6ZMJ2 495 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 SPATA2LQ8IUW3 424 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-212ENST00000478616 FAM186BQ8IYM0 893 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 OR6B3Q8NGW1 331 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 CCDC47Q96A33 483 aaKnown RBP20.04■□□□□ 0.8
SREBF1-212ENST00000478616 SYAP1Q96A49 352 aaPredicted RBP20.04■□□□□ 0.8
SREBF1-212ENST00000478616 TRMT2BQ96GJ1 504 aaKnown RBP20.04■□□□□ 0.8
SREBF1-212ENST00000478616 SLC22A12Q96S37 553 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 ZNF518BQ9C0D4 1074 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 GPR88Q9GZN0 384 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 FAM86C1Q9NVL1 165 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 CCL26Q9Y258 94 aa20.04■□□□□ 0.8
SREBF1-212ENST00000478616 H0Y858 1186 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 CLDN5O00501 218 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 DCNP07585 359 aaKnown RBP20.03■□□□□ 0.8
SREBF1-212ENST00000478616 GDI1P31150 447 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
SREBF1-212ENST00000478616 TNNC1P63316 161 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 ENPEPQ07075 957 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 VEPH1Q14D04 833 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 TXNDC8Q6A555 127 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 ISM2Q6H9L7 571 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 DTWD2Q8NBA8 298 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 PJA1Q8NG27 643 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 SEMA4DQ92854 862 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 TWNKQ96RR1 684 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 TRMT61BQ9BVS5 477 aaKnown RBP20.03■□□□□ 0.8
SREBF1-212ENST00000478616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.03■□□□□ 0.83e-6■■■□□ 16.8
SREBF1-212ENST00000478616 FRMD4BQ9Y2L6 1034 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 VPS13AQ96RL7 3174 aa20.03■□□□□ 0.8
SREBF1-212ENST00000478616 GOLGA6L4A6NEF3 574 aa20.02■□□□□ 0.8
SREBF1-212ENST00000478616 PHACTR2O75167 634 aa20.02■□□□□ 0.8
SREBF1-212ENST00000478616 CSH1P0DML2 217 aa20.02■□□□□ 0.8
SREBF1-212ENST00000478616 CSH2P0DML3 217 aa20.02■□□□□ 0.8
SREBF1-212ENST00000478616 TARSP26639 723 aaKnown RBP20.02■□□□□ 0.8
SREBF1-212ENST00000478616 CDC25CP30307 473 aa20.02■□□□□ 0.8
SREBF1-212ENST00000478616 PSMC2P35998 433 aaKnown RBP20.02■□□□□ 0.8
SREBF1-212ENST00000478616 NUBP1P53384 320 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms