RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PTPAQ15257 358 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 CST9Q5W186 159 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 GADL1Q6ZQY3 521 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 GPC2Q8N158 579 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 PRR18Q8N4B5 295 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 RNPEPQ9H4A4 650 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 TERF2IPQ9NYB0 399 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 IP6K2Q9UHH9 426 aa5.86□□□□□ -1.47
VPS50-214ENST00000477935 CCDC78A2IDD5 438 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 UNC119BA6NIH7 251 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 ERVV-2B6SEH9 535 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 DTNBO60941 627 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 SERPINB2P05120 415 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 CD1AP06126 327 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 MTHFD1P11586 935 aaKnown RBP5.85□□□□□ -1.47
VPS50-214ENST00000477935 CKBP12277 381 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 KRT4P19013 534 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 DDX6P26196 483 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-214ENST00000477935 HMGA2P52926 109 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 NOMO3P69849 1222 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 RESTQ13127 1097 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 NOMO2Q5JPE7 1267 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 B3GNTL1Q67FW5 361 aaPredicted RBP5.85□□□□□ -1.47
VPS50-214ENST00000477935 Q6ZPA2 131 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 USP50Q70EL3 339 aaPredicted RBP5.85□□□□□ -1.47
VPS50-214ENST00000477935 CATIPQ7Z7H3 387 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 LDLRAD3Q86YD5 345 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 ARHGEF19Q8IW93 802 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 TMEM132CQ8N3T6 1108 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 TBC1D15Q8TC07 691 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 NUP133Q8WUM0 1156 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 ZNF622Q969S3 477 aaKnown RBP eCLIP5.85□□□□□ -1.47
VPS50-214ENST00000477935 COG3Q96JB2 828 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 PRRX2Q99811 253 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 VRK1Q99986 396 aaPredicted RBP5.85□□□□□ -1.47
VPS50-214ENST00000477935 MRIQ9BWK5 157 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 BRIP1Q9BX63 1249 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 ANKFY1Q9P2R3 1169 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 SRP68Q9UHB9 627 aaKnown RBP5.85□□□□□ -1.47
VPS50-214ENST00000477935 CASP8AP2Q9UKL3 1982 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 SCN4AP35499 1836 aa5.85□□□□□ -1.47
VPS50-214ENST00000477935 FAM208AQ9UK61 1670 aaKnown RBP5.85□□□□□ -1.47
VPS50-214ENST00000477935 CDKL5O76039 1030 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 ABLIM3O94929 683 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 POU2F2P09086 479 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 FGFR4P22455 802 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 HSD11B2P80365 405 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 GUCY1B3Q02153 619 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 DPTQ07507 201 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 SLFN5Q08AF3 891 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 PIN1Q13526 163 aaPredicted RBP5.84□□□□□ -1.47
VPS50-214ENST00000477935 KHDC1Q4VXA5 237 aaKnown RBP5.84□□□□□ -1.47
VPS50-214ENST00000477935 USP45Q70EL2 814 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 IL17RDQ8NFM7 739 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 MARS2Q96GW9 593 aaKnown RBP5.84□□□□□ -1.47
VPS50-214ENST00000477935 NUP88Q99567 741 aaPredicted RBP5.84□□□□□ -1.47
VPS50-214ENST00000477935 SERHL2Q9H4I8 314 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 USP25Q9UHP3 1055 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 THSD7BQ9C0I4 1608 aa5.84□□□□□ -1.47
VPS50-214ENST00000477935 SZT2Q5T011 3432 aa5.84□□□□□ -1.48
VPS50-214ENST00000477935 RTL1A6NKG5 1358 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 COL4A3Q01955 1670 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 LRRC14BA6NHZ5 514 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 SPDEFO95238 335 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 GPANK1O95872 356 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 HSP90AB1P08238 724 aaKnown RBP5.83□□□□□ -1.48
VPS50-214ENST00000477935 PF4V1P10720 104 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 MALP21145 153 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 CRKLP46109 303 aaKnown RBP5.83□□□□□ -1.48
VPS50-214ENST00000477935 MXRA7P84157 204 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 SNAPC2Q13487 334 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 TP53BP2Q13625 1128 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 SPDYE7PQ495Y7 208 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 FLYWCH1Q4VC44 716 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 UTP14CQ5TAP6 766 aaKnown RBP5.83□□□□□ -1.48
VPS50-214ENST00000477935 ARMC6Q6NXE6 501 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 VRK3Q8IV63 474 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 PNKPQ96T60 521 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 PACSIN1Q9BY11 444 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 GTPBP4Q9BZE4 634 aaKnown RBP5.83□□□□□ -1.48
VPS50-214ENST00000477935 WDR11Q9BZH6 1224 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 MAN1C1Q9NR34 630 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 JKAMPQ9P055 326 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 NARFQ9UHQ1 456 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 POLHQ9Y253 713 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 ANKRD6Q9Y2G4 727 aa5.83□□□□□ -1.48
VPS50-214ENST00000477935 MAP2P11137 1827 aaKnown RBP5.83□□□□□ -1.48
VPS50-214ENST00000477935 EDC4Q6P2E9 1401 aaKnown RBP5.82□□□□□ -1.48
VPS50-214ENST00000477935 KDRP35968 1356 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 RNF123Q5XPI4 1314 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 E2F8A0AVK6 867 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 TMEM191CA6NGB0 347 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 SLC43A1O75387 559 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 AGFG2O95081 481 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 CELF2O95319 508 aaKnown RBP5.82□□□□□ -1.48
VPS50-214ENST00000477935 FCER1AP12319 257 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 VCAM1P19320 739 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 AKAP5P24588 427 aa5.82□□□□□ -1.48
VPS50-214ENST00000477935 ZEB1P37275 1124 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms