RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 NT5DC1Q5TFE4 455 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 TXNDC8Q6A555 127 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 LRRC69Q6ZNQ3 347 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 APBB1IPQ7Z5R6 666 aaPredicted RBP10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 USP37Q86T82 979 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 TXNDC5Q8NBS9 432 aaKnown RBP10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 MCPH1Q8NEM0 835 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 GIPC2Q8TF65 315 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 ATP2A3Q93084 1043 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 KIFC3Q9BVG8 833 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 ZMYM5Q9UJ78 669 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 PCOLCE2Q9UKZ9 415 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 WNT6Q9Y6F9 365 aa10.54□□□□□ -0.72
SMARCB1-206ENST00000477836 PLXND1Q9Y4D7 1925 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 H3BQV1 296 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 M0QZQ0 153 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 STX6O43752 255 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 DEXIO95424 95 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 ATF6P18850 670 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 SYT1P21579 422 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 NR1H3Q13133 447 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 KRT25Q7Z3Z0 450 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 NEK8Q86SG6 692 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 POTEDQ86YR6 584 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 TMEM130Q8N3G9 435 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 GALNT15Q8N3T1 639 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 ALLCQ8N6M5 410 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 OSCP1Q8WVF1 389 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 HSD17B14Q9BPX1 270 aa10.53□□□□□ -0.72
SMARCB1-206ENST00000477836 HELZP42694 1942 aaKnown RBP10.52□□□□□ -0.72
SMARCB1-206ENST00000477836 MUC22E2RYF6 1773 aaPredicted RBP10.52□□□□□ -0.72
SMARCB1-206ENST00000477836 SGK1O00141 431 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 KLF8O95600 359 aaPredicted RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 ATXN1LP0C7T5 689 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 ZSCAN22P10073 491 aaPredicted RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 FDPSP14324 419 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 GCFC2P16383 781 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 DDX6P26196 483 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 TIE1P35590 1138 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 EIF2S3P41091 472 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 NAMPTP43490 491 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 TUFMP49411 452 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 FOSBP53539 338 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 MRPS21P82921 87 aaKnown RBP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 PKP1Q13835 747 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 TRIM29Q14134 588 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 MYBPC2Q14324 1141 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 EML3Q32P44 896 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 OVOS1Q6IE37 1185 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 PCSK4Q6UW60 755 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 SLC36A4Q6YBV0 504 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 TMEM150AQ86TG1 271 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 SLFN12Q8IYM2 578 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 RGL4Q8IZJ4 473 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 FAM181AQ8N9Y4 354 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 C8orf76Q96K31 380 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 ACAP3Q96P50 834 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 NACC1Q96RE7 527 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 CDT1Q9H211 546 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 PRDM16Q9HAZ2 1276 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 TOR4AQ9NXH8 423 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 CNTN3Q9P232 1028 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 TUBGCP4Q9UGJ1 667 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 TNFSF13BQ9Y275 285 aa10.52□□□□□ -0.73
SMARCB1-206ENST00000477836 DENND4CQ5VZ89 1909 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 SPTA1P02549 2419 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 TEX51A0A1B0GUA7 166 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 A0A1W2PQD8 194 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 TCRBV21S2A2A0A5A6 115 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 F11P03951 625 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 XBP1P17861 261 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 OPRD1P41143 372 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 EFNA5P52803 228 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 NLRP12P59046 1061 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 DMP1Q13316 513 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 ZNF268Q14587 947 aaPredicted RBP10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 NPY5RQ15761 445 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 ZNF568Q3ZCX4 644 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 SLC39A12Q504Y0 691 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 GPR155Q7Z3F1 870 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 SLC41A1Q8IVJ1 513 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 EFCAB13Q8IY85 973 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 IL17RCQ8NAC3 791 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 MRPS31Q92665 395 aaKnown RBP10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 HSPA12BQ96MM6 686 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 ARID3AQ99856 593 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 ZDHHC4Q9NPG8 344 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 HSFX1Q9UBD0 423 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 DNMT3LQ9UJW3 386 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 MTMR6Q9Y217 621 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 TEX15Q9BXT5 2789 aa10.51□□□□□ -0.73
SMARCB1-206ENST00000477836 CITO14578 2027 aa10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 RRP8O43159 456 aaKnown RBP10.5□□□□□ -0.73
SMARCB1-206ENST00000477836 HARSP12081 509 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms