RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 BACE1P56817 501 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 EIF3EP60228 445 aaKnown RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 CLUL1Q15846 466 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 C15orf59Q2T9L4 293 aaPredicted RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 TSNAXIP1Q2TAA8 658 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 GLRA4Q5JXX5 417 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 CCNYQ8ND76 341 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 LMO3Q8TAP4 145 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.24□□□□□ -0.77
CMC1-209ENST00000477739 SEC14L1Q92503 715 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 SHC3Q92529 594 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 ZNF516Q92618 1163 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 MOCOSQ96EN8 888 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 RAB3IPQ96QF0 476 aaPredicted RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 RPS6KC1Q96S38 1066 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 GOLGA8TH3BQL2 631 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 NEMP1O14524 444 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 KCNN4O15554 427 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 ASAP2O43150 1006 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 AP1G2O75843 785 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 DGAT1O75907 488 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 MYL2P10916 166 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 RFC1P35251 1148 aaPredicted RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 BTKQ06187 659 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 ZNF699Q32M78 642 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 ANGEL2Q5VTE6 544 aaKnown RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 DSTYKQ6XUX3 929 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 NIPA1Q7RTP0 329 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 YTHDF3Q7Z739 585 aaKnown RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 TEX2Q8IWB9 1127 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 CKAP2Q8WWK9 683 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 ZNF606Q8WXB4 792 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 MRPL47Q9HD33 250 aaKnown RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 UVRAGQ9P2Y5 699 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 CHKBQ9Y259 395 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 B2RBV5 119 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 M0QYV0 167 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 RNF8O76064 485 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 PDE5AO76074 875 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 PGK2P07205 417 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 KRT3P12035 628 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 ACTR2P61160 394 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 PTK7Q13308 1070 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 CUL2Q13617 745 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 TMCO4Q5TGY1 634 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 PPFIBP2Q8ND30 876 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 JOSD2Q8TAC2 188 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 PGBD4Q96DM1 585 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 SERPINB12Q96P63 405 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 ASCC2Q9H1I8 757 aaPredicted RBP10.24□□□□□ -0.77
CMC1-209ENST00000477739 PCYOX1Q9UHG3 505 aa10.24□□□□□ -0.77
CMC1-209ENST00000477739 TRIM49D1C9J1S8 452 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 I3L4J1 428 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 MAPTP10636 758 aaKnown RBP10.23□□□□□ -0.77
CMC1-209ENST00000477739 MAMLD1Q13495 774 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 MAPK6Q16659 721 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 RNF220Q5VTB9 566 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 NXNQ6DKJ4 435 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 OTOAQ7RTW8 1153 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 NME8Q8N427 588 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 FEZF2Q8TBJ5 459 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 NAF1Q96HR8 494 aaKnown RBP10.23□□□□□ -0.77
CMC1-209ENST00000477739 APOL2Q9BQE5 337 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 SENP7Q9BQF6 1050 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 TIPINQ9BVW5 301 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 TSSK1BQ9BXA7 367 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 RXFP1Q9HBX9 757 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 APOBEC3GQ9HC16 384 aaKnown RBP10.23□□□□□ -0.77
CMC1-209ENST00000477739 SPDYE5A6NIY4 337 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 COPEO14579 308 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 UGT1A9O60656 530 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 TRPA1O75762 1119 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 PROSCO94903 275 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 FDX1P10109 184 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 ELK3P41970 407 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 YARSP54577 528 aaKnown RBP10.23□□□□□ -0.77
CMC1-209ENST00000477739 FAAP100Q0VG06 881 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 EMC2Q15006 297 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 MSS51Q4VC12 460 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 C1orf146Q5VVC0 180 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 RGS9BPQ6ZS82 235 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 FAM13CQ8NE31 585 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 CDHR1Q96JP9 859 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 MMP19Q99542 508 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 TRIM55Q9BYV6 548 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 ACAD9Q9H845 621 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 UGT1A7Q9HAW7 530 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 UGT1A10Q9HAW8 530 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 UGT1A8Q9HAW9 530 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 CYP26B1Q9NR63 512 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.23□□□□□ -0.77
CMC1-209ENST00000477739 MCF2LO15068 1137 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 DNAJC8O75937 253 aaPredicted RBP10.23□□□□□ -0.77
CMC1-209ENST00000477739 PGM1P36871 562 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 GRM1Q13255 1194 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 ITIH4Q14624 930 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 KBTBD12Q3ZCT8 623 aa10.23□□□□□ -0.77
CMC1-209ENST00000477739 ZNF568Q3ZCX4 644 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms