RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 USP8P40818 1118 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 RAB27AP51159 221 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 ADCY1Q08828 1119 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 LPPQ93052 612 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 C11orf70Q9BRQ4 267 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 LRRC19Q9H756 370 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 RC3H2Q9HBD1 1191 aaKnown RBP12.84□□□□□ -0.35
PRPF39-203ENST00000477626 CRTAC1Q9NQ79 661 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 ZDHHC18Q9NUE0 388 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 ADAM22Q9P0K1 906 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
PRPF39-203ENST00000477626 ANAPC1Q9H1A4 1944 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 RAD51CO43502 376 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 IVDP26440 423 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 THPOP40225 353 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 NSFP46459 744 aaKnown RBP12.84□□□□□ -0.35
PRPF39-203ENST00000477626 CLCNKBP51801 687 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 UBXN4Q92575 508 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 TSPAN16Q9UKR8 245 aa12.84□□□□□ -0.35
PRPF39-203ENST00000477626 POLNQ7Z5Q5 900 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 RNF168Q8IYW5 571 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 FUKQ8N0W3 1084 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 CAVIN3Q969G5 261 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 NT5C1AQ9BXI3 368 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 NYNRINQ9P2P1 1898 aaKnown RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 ZSCAN5CA6NGD5 496 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 PGRMC1O00264 195 aaKnown RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 LRCH4O75427 683 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 RFC1P35251 1148 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 ZNF394Q53GI3 561 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 HNRNPABQ99729 332 aaKnown RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 NEUROG2Q9H2A3 272 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 HMX1Q9NP08 348 aaPredicted RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 CTTNBP2NLQ9P2B4 639 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 LCMT1Q9UIC8 334 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 SCINQ9Y6U3 715 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 DOCK4Q8N1I0 1966 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 FAM170AA1A519 330 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 ATP8B1O43520 1251 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 RPL9P32969 192 aaKnown RBP12.83□□□□□ -0.36
PRPF39-203ENST00000477626 CACNA2D1P54289 1103 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 DUPD1Q68J44 220 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 COLGALT2Q8IYK4 626 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 TMEM35BQ8NCS4 154 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 ZMIZ2Q8NF64 920 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 KCTD13Q8WZ19 329 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 EPB41L4BQ9H329 900 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 SPC25Q9HBM1 224 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 ANAPC7Q9UJX3 599 aa12.83□□□□□ -0.36
PRPF39-203ENST00000477626 TRANK1O15050 2925 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 BEST1O76090 585 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 TAP1Q03518 808 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 CYP4A22Q5TCH4 519 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 UBE2Q1Q7Z7E8 422 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 MREGQ8N565 214 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 SH3TC2Q8TF17 1288 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 CASKIN2Q8WXE0 1202 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 ELAC1Q9H777 363 aaKnown RBP12.82□□□□□ -0.36
PRPF39-203ENST00000477626 F8VP50 259 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 F8W810 466 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 PAPSS1O43252 624 aaPredicted RBP12.82□□□□□ -0.36
PRPF39-203ENST00000477626 MED7O43513 233 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 TBC1D4O60343 1298 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 ITGB1P05556 798 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 SETSIPP0DME0 302 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 IL4RP24394 825 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 MTFR1Q15390 333 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 PTPROQ16827 1216 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 FAM183BPQ6ZVS7 135 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 SLC13A5Q86YT5 568 aaPredicted RBP12.82□□□□□ -0.36
PRPF39-203ENST00000477626 RAET1EQ8TD07 263 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 FAF2Q96CS3 445 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 ZNF333Q96JL9 665 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 GAD1Q99259 594 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 GRHL1Q9NZI5 618 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 USP3Q9Y6I4 520 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 SEC31AO94979 1220 aaKnown RBP12.82□□□□□ -0.36
PRPF39-203ENST00000477626 EOMESO95936 686 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 FYNP06241 537 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 CTSHP09668 335 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 RARAP10276 462 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 GHRP10912 638 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 YARSP54577 528 aaKnown RBP12.82□□□□□ -0.36
PRPF39-203ENST00000477626 PLCB3Q01970 1234 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 MYO1EQ12965 1108 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 MRPL58Q14197 206 aaKnown RBP12.82□□□□□ -0.36
PRPF39-203ENST00000477626 TEX35Q5T0J7 233 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 ZDHHC24Q6UX98 284 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 SCML4Q8N228 414 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 ANKRD52Q8NB46 1076 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
PRPF39-203ENST00000477626 STIM2Q9P246 746 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms