RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 LINC00301Q8NCQ3 95 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 GLIS3Q8NEA6 775 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 CHFRQ96EP1 664 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 TRMT2BQ96GJ1 504 aaKnown RBP12.2□□□□□ -0.46
HDLBP-236ENST00000477477 ANKRD36BP1Q96IX9 119 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 MYRFLQ96LU7 910 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 TNMDQ9H2S6 317 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 EBF3Q9H4W6 596 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 UXTQ9UBK9 157 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-236ENST00000477477 GTF3C4Q9UKN8 822 aa12.2□□□□□ -0.46
HDLBP-236ENST00000477477 CDV3Q9UKY7 258 aaKnown RBP12.2□□□□□ -0.46
HDLBP-236ENST00000477477 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 PTPRJQ12913 1337 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 OTOL1A6NHN0 477 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 HCRTO43612 131 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 STX6O43752 255 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 LRP3O75074 770 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 ATXN1P54253 815 aaKnown RBP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 GRSF1Q12849 480 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 STK38Q15208 465 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 E2F4Q16254 413 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 SOWAHAQ2M3V2 549 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 TMEM196Q5HYL7 178 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 LMBRD2Q68DH5 695 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 PKN3Q6P5Z2 889 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 LIMS2Q7Z4I7 341 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 SPATA2LQ8IUW3 424 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 OR5B17Q8NGF7 314 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 FUBP3Q96I24 572 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-236ENST00000477477 TRIM9Q9C026 710 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 LRRC27Q9C0I9 530 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 FOXD4L1Q9NU39 408 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 INTS13Q9NVM9 706 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 KBTBD4Q9NVX7 518 aa12.19□□□□□ -0.46
HDLBP-236ENST00000477477 TCHHQ07283 1943 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 ZNF233A6NK53 670 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 K7ELQ4 463 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-236ENST00000477477 TRDMT1O14717 391 aaKnown RBP12.18□□□□□ -0.46
HDLBP-236ENST00000477477 EIF3DO15371 548 aaKnown RBP eCLIP12.18□□□□□ -0.46
HDLBP-236ENST00000477477 TNNC2P02585 160 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 ARSAP15289 507 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 HOXC13P31276 330 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 MAGEA11P43364 429 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 FAM160A1Q05DH4 1040 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 MYO1EQ12965 1108 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 USP4Q13107 963 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 MTF1Q14872 753 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 PDGFRLQ15198 375 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 SURF1Q15526 300 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 ZNF77Q15935 545 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 DUOXA2Q1HG44 320 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 FSTL4Q6MZW2 842 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 CC2D1AQ6P1N0 951 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-236ENST00000477477 FAM171BQ6P995 826 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 DPH6Q7L8W6 267 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.18□□□□□ -0.46
HDLBP-236ENST00000477477 CBWD2Q8IUF1 395 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 SCN4BQ8IWT1 228 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 KBTBD7Q8WVZ9 684 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 HPDLQ96IR7 371 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 SYT15Q9BQS2 421 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 RTKNQ9BST9 563 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 TRPC7Q9HCX4 862 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 SEMA4GQ9NTN9 838 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 HSPBP1Q9NZL4 362 aa12.18□□□□□ -0.46
HDLBP-236ENST00000477477 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
HDLBP-236ENST00000477477 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.18□□□□□ -0.46
HDLBP-236ENST00000477477 TRAV19A0A0A6YYK7 116 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 SPTLC2O15270 562 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 PPP6R2O75170 966 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 ATP2C2O75185 946 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 CKMP06732 381 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 HOXD13P35453 343 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 PSMC1P62191 440 aaKnown RBP12.17□□□□□ -0.46
HDLBP-236ENST00000477477 ASIC1P78348 528 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 AMPD2Q01433 879 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 CNNM4Q6P4Q7 775 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 C4orf50Q6ZRC1 276 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 CEP68Q76N32 757 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 EPM2AIP1Q7L775 607 aaPredicted RBP12.17□□□□□ -0.46
HDLBP-236ENST00000477477 WDR49Q8IV35 697 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 MYLPFQ96A32 169 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 DHX58Q96C10 678 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 KIAA1586Q9HCI6 787 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 CDH9Q9ULB4 789 aa12.17□□□□□ -0.46
HDLBP-236ENST00000477477 CCDC163A0A0D9SF12 145 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 ATG13O75143 517 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 RNF40O75150 1001 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 YEATS4O95619 227 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 EGFP01133 1207 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 USP17L7P0C7H9 530 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 DRD1P21728 446 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 WARSP23381 471 aaKnown RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 LMO2P25791 158 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 GJA4P35212 333 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 AMPD3Q01432 767 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms