RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	GRK3	P35626	688 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CPT1A	P50416	773 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GHRHR	Q02643	423 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TNFAIP2	Q03169	654 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MTMR1	Q13613	665 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CUL4A	Q13619	759 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	HSP90AA2P	Q14568	343 aa	Predicted RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PGM5	Q15124	567 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	UBE2S	Q16763	222 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TMEM266	Q2M3C6	531 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PAN2	Q504Q3	1202 aa	Known RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MAMDC4	Q6UXC1	1216 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SEPT14	Q6ZU15	432 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ANKS3	Q6ZW76	656 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	NEK8	Q86SG6	692 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DHX37	Q8IY37	1157 aa	Known RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DIS3L2	Q8IYB7	885 aa	Known RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FAM133A	Q8N9E0	248 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PCSK9	Q8NBP7	692 aa	Known RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SH3TC2	Q8TF17	1288 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TRIB2	Q92519	343 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	USP6NL	Q92738	828 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PDCD2L	Q9BRP1	358 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	AARSD1	Q9BTE6	412 aa	Known RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	RAB34	Q9BZG1	259 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	WDR11	Q9BZH6	1224 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FOXP1	Q9H334	677 aa	Predicted RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	BARX1	Q9HBU1	254 aa	Predicted RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ING1	Q9UK53	422 aa	Predicted RBP	5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	KCNJ14	Q9UNX9	436 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289		A0A0G2JMZ2	1700 aa		5.06	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CASP8AP2	Q9UKL3	1982 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	COL11A1	P12107	1806 aa	Predicted RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	BLACE	A4D250	179 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MEIS2	O14770	477 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PRODH	O43272	600 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CCNT1	O60563	726 aa	Known RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	KPNA6	O60684	536 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DKC1	O60832	514 aa	Known RBP eCLIP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DUSP11	O75319	330 aa	Known RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CTDNEP1	O95476	244 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CNOT4	O95628	575 aa	Known RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	BMP15	O95972	392 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GH1	P01241	217 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	C6orf222	P0C671	652 aa	Predicted RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PABPC1	P11940	636 aa	Known RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CCL5	P13501	91 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ATP2B1	P20020	1258 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CTGF	P29279	349 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DNAJA1	P31689	397 aa	Known RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SREBF1	P36956	1147 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TRAPPC10	P48553	1259 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	NUCB2	P80303	420 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GUCY1B3	Q02153	619 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ORC2	Q13416	577 aa	Predicted RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SMAD2	Q15796	467 aa	Known RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CCL14	Q16627	93 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SKIDA1	Q1XH10	827 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	KIZ	Q2M2Z5	673 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	LETM2	Q2VYF4	491 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CCDC144B	Q3MJ40	725 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CEP55	Q53EZ4	464 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	RILPL1	Q5EBL4	403 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF585A	Q6P3V2	769 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PIK3AP1	Q6ZUJ8	805 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	NIPA1	Q7RTP0	329 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	BRAP	Q7Z569	592 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PLA2G4D	Q86XP0	818 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PALM2	Q8IXS6	379 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	FBXO18	Q8NFZ0	1043 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	OR6J1	Q8NGC5	347 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TBCK	Q8TEA7	893 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TBC1D5	Q92609	795 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ARMC5	Q96C12	935 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF396	Q96N95	335 aa	Predicted RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DEFB118	Q96PH6	123 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	KCNJ15	Q99712	375 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MXRA8	Q9BRK3	442 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZNF577	Q9BSK1	485 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	AZI2	Q9H6S1	392 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	JADE2	Q9NQC1	790 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	XPNPEP3	Q9NQH7	507 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	KCND1	Q9NSA2	647 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	TBC1D22B	Q9NU19	505 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	DDX20	Q9UHI6	824 aa	Known RBP	5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ZFP69B	Q9UJL9	534 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289		Q9Y3F1	56 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	MGAM	O43451	1857 aa		5.05	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	PLXNB2	O15031	1838 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	BTBD18	B2RXH4	712 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	ACOT7	O00154	380 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	STX6	O43752	255 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GAS7	O60861	476 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	CABYR	O75952	493 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SGPL1	O95470	568 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	SNAI1	O95863	264 aa	Predicted RBP	5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	IL18BP	O95998	194 aa		5.04	□□□□□ -1.6
NSMCE4A-208	ENST00000477289	GJB1	P08034	283 aa		5.04	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms