RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 INTS8Q75QN2 995 aaKnown RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 TRIM59Q8IWR1 403 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 B3GALT6Q96L58 329 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 TMEM121BQ9BXQ6 578 aaPredicted RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 GPR62Q9BZJ7 368 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 PLA2G2FQ9BZM2 168 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 CXCL16Q9H2A7 254 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 TAB2Q9NYJ8 693 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 ADAM28Q9UKQ2 775 aa12.42□□□□□ -0.42
LSM2-212ENST00000477182 MRPS23Q9Y3D9 190 aaKnown RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 DSPP15924 2871 aaKnown RBP12.42□□□□□ -0.42
LSM2-212ENST00000477182 NBEAQ8NFP9 2946 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 TTC26A0AVF1 554 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 ARL5CA6NH57 179 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 LACTBL1A8MY62 500 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 EPN2O95208 641 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 IL18RAPO95256 599 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 DLATP10515 647 aaKnown RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 CHRNB1P11230 501 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 HOXA6P31267 233 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 NOVA1P51513 510 aaKnown RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 VAMP7P51809 220 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 DLG4P78352 724 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 POU5F1Q01860 360 aaKnown RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 PPP2R3AQ06190 1150 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 LRRC32Q14392 662 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 DCAF17Q5H9S7 520 aaPredicted RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 LMBRD2Q68DH5 695 aaPredicted RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 RNF43Q68DV7 783 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 ANKRD20A12PQ8NF67 263 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 TMC2Q8TDI7 906 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 PARD3BQ8TEW8 1205 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 ZCCHC14Q8WYQ9 949 aaKnown RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 FAM84AQ96KN4 292 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 FNBP1Q96RU3 617 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 NOTCH4Q99466 2003 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 TUBGCP2Q9BSJ2 902 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 TRMT61BQ9BVS5 477 aaKnown RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 TOPORSQ9NS56 1045 aaPredicted RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 LIMA1Q9UHB6 759 aaKnown RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 PCDHGA5Q9Y5G8 931 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.41□□□□□ -0.42
LSM2-212ENST00000477182 WDFY3Q8IZQ1 3526 aa12.41□□□□□ -0.42
LSM2-212ENST00000477182 FLNBO75369 2602 aaKnown RBP12.41□□□□□ -0.42
LSM2-212ENST00000477182 SF3B1O75533 1304 aaKnown RBP eCLIP12.4□□□□□ -0.42
LSM2-212ENST00000477182 PTPRJQ12913 1337 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 SDK1Q7Z5N4 2213 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 GOLGA6L3A6NEY3 463 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 LRRIQ3A6PVS8 624 aaPredicted RBP12.4□□□□□ -0.42
LSM2-212ENST00000477182 F8W810 466 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 K7ESF4 209 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 TADA2AO75478 443 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 MLH1P40692 756 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 COPB1P53618 953 aaKnown RBP12.4□□□□□ -0.42
LSM2-212ENST00000477182 FANCCQ00597 558 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 PLCB2Q00722 1185 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 ZNF252P-AS1Q0IIN9 211 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 SURF1Q15526 300 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 MAN2A1Q16706 1144 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 HEATR6Q6AI08 1181 aaKnown RBP12.4□□□□□ -0.42
LSM2-212ENST00000477182 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 JADE1Q6IE81 842 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 PRSS55Q6UWB4 352 aaPredicted RBP12.4□□□□□ -0.42
LSM2-212ENST00000477182 ALKAL1Q6UXT8 129 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 APTXQ7Z2E3 356 aaKnown RBP12.4□□□□□ -0.42
LSM2-212ENST00000477182 CACNA2D4Q7Z3S7 1137 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 WDR5BQ86VZ2 330 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 SLC7A14Q8TBB6 771 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 ING5Q8WYH8 240 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 GATA6Q92908 595 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 SLC35C1Q96A29 364 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 MCRS1Q96EZ8 462 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 MSANTD3Q96H12 275 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 ZFP42Q96MM3 310 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 GAD1Q99259 594 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 CGRRF1Q99675 332 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 VPS16Q9H269 839 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 MMRN2Q9H8L6 949 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 PLEKHA5Q9HAU0 1116 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 ZFP14Q9HCL3 533 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 AVENQ9NQS1 362 aaPredicted RBP12.4□□□□□ -0.42
LSM2-212ENST00000477182 DNMT3BQ9UBC3 853 aaKnown RBP12.4□□□□□ -0.42
LSM2-212ENST00000477182 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 GIT1Q9Y2X7 761 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 PIAS3Q9Y6X2 628 aa12.4□□□□□ -0.42
LSM2-212ENST00000477182 TICRRQ7Z2Z1 1910 aa12.39□□□□□ -0.43
LSM2-212ENST00000477182 SCN1AP35498 2009 aa12.39□□□□□ -0.43
LSM2-212ENST00000477182 PES1O00541 588 aaKnown RBP12.39□□□□□ -0.43
LSM2-212ENST00000477182 SERPINC1P01008 464 aa12.39□□□□□ -0.43
LSM2-212ENST00000477182 NFICP08651 508 aa12.39□□□□□ -0.43
LSM2-212ENST00000477182 TNNI1P19237 187 aa12.39□□□□□ -0.43
LSM2-212ENST00000477182 RAP1GAPP47736 663 aa12.39□□□□□ -0.43
LSM2-212ENST00000477182 SCNN1GP51170 649 aa12.39□□□□□ -0.43
LSM2-212ENST00000477182 MLLT6P55198 1093 aaPredicted RBP12.39□□□□□ -0.43
LSM2-212ENST00000477182 ENPEPQ07075 957 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms