RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ZNF252P-AS1Q0IIN9 211 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 ERCC6LQ2NKX8 1250 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 MNS1Q8NEH6 495 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 SLC2A14Q8TDB8 520 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 RSPH1Q8WYR4 309 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 C18orf8Q96DM3 657 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 EPC1Q9H2F5 836 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 CRTAC1Q9NQ79 661 aa15.29■□□□□ 0.04
COL4A6-206ENST00000477085 CLDN5O00501 218 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 ADORA2BP29275 332 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 RGS7P49802 495 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 PEX5P50542 639 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 PDE4CQ08493 712 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 STILQ15468 1287 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 FUKQ8N0W3 1084 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 TMEM86AQ8N2M4 240 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 CEP112Q8N8E3 955 aa15.28■□□□□ 0.04
COL4A6-206ENST00000477085 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
COL4A6-206ENST00000477085 MRPL47Q9HD33 250 aaKnown RBP15.28■□□□□ 0.04
COL4A6-206ENST00000477085 TDRD15B5MCY1 1934 aaKnown RBP15.28■□□□□ 0.04
COL4A6-206ENST00000477085 MYBPHLA2RUH7 354 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 EFCAB8A8MWE9 144 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 CYP11A1P05108 521 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 GSCP56915 257 aaPredicted RBP15.27■□□□□ 0.04
COL4A6-206ENST00000477085 RNASE9P60153 205 aaKnown RBP15.27■□□□□ 0.04
COL4A6-206ENST00000477085 ZNF572Q7Z3I7 529 aaPredicted RBP15.27■□□□□ 0.04
COL4A6-206ENST00000477085 ANKRD52Q8NB46 1076 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 C3orf20Q8ND61 904 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 JOSD2Q8TAC2 188 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 URGCPQ8TCY9 931 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 PIWIL1Q96J94 861 aaKnown RBP15.27■□□□□ 0.04
COL4A6-206ENST00000477085 TNIP3Q96KP6 325 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 SUSD3Q96L08 255 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 MCEEQ96PE7 176 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 SLC4A5Q9BY07 1137 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 NRDE2Q9H7Z3 1164 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 KANSL3Q9P2N6 904 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 SCINQ9Y6U3 715 aa15.27■□□□□ 0.04
COL4A6-206ENST00000477085 E5RJQ4 531 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 GOLGA8SH3BPF8 625 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 MYO1FO00160 1098 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 BEST1O76090 585 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 PROSCO94903 275 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 PARNO95453 639 aaKnown RBP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 RFC1P35251 1148 aaPredicted RBP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 LHX1P48742 406 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 ZNF268Q14587 947 aaPredicted RBP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 MDH1BQ5I0G3 518 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 AADACL2Q6P093 401 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 DNAJC24Q6P3W2 148 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 MCRS1Q96EZ8 462 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 HNRNPABQ99729 332 aaKnown RBP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 B3GNT5Q9BYG0 378 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 ST7Q9NRC1 585 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 CTAGE15A4D2H0 777 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 SIGLEC16A6NMB1 481 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 CES2O00748 559 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 CTAGE8P0CG41 777 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 ODC1P11926 461 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 OR1G1P47890 313 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 RPL34P49207 117 aaKnown RBP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 RNASELQ05823 741 aaKnown RBP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 ELF2Q15723 593 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 NECAB2Q7Z6G3 386 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 TMEM110Q86TL2 294 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 CTAGE6Q86UF2 777 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 CTAGE4Q8IX94 777 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 KHSRPQ92945 711 aaKnown RBP eCLIP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 PBKQ96KB5 322 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 TMEM209Q96SK2 561 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 PKMYT1Q99640 499 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 SYT15Q9BQS2 421 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 TMEM30AQ9NV96 361 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 STRIP2Q9ULQ0 834 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 PRG3Q9Y2Y8 225 aaPredicted RBP15.26■□□□□ 0.03
COL4A6-206ENST00000477085 PCDHA3Q9Y5H8 950 aa15.26■□□□□ 0.03
COL4A6-206ENST00000477085 TTC3P53804 2025 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 F8VP50 259 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 TMEM189-UBE2V1I3L0A0 370 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 TIMP1P01033 207 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 TCF4P15884 667 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 CTNNA1P35221 906 aaKnown RBP15.25■□□□□ 0.03
COL4A6-206ENST00000477085 RABGGTBP53611 331 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 TAS2R40P59535 323 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 ZNF211Q13398 564 aaPredicted RBP15.25■□□□□ 0.03
COL4A6-206ENST00000477085 TAF5Q15542 800 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 TRNP1Q6NT89 227 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 FAM43BQ6ZT52 329 aaPredicted RBP15.25■□□□□ 0.03
COL4A6-206ENST00000477085 FAM183BPQ6ZVS7 135 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 UBE2Q1Q7Z7E8 422 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 LRRTM3Q86VH5 581 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 NPAS4Q8IUM7 802 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 SCUBE3Q8IX30 993 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 RASGEF1CQ8N431 466 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 EMC1Q8N766 993 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 SPATA4Q8NEY3 305 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 OR10T2Q8NGX3 314 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 STK32AQ8WU08 396 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 TMLHEQ9NVH6 421 aa15.25■□□□□ 0.03
COL4A6-206ENST00000477085 HESX1Q9UBX0 185 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms