RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 ROPN1BQ9BZX4 212 aaPredicted RBP12.11□□□□□ -0.47
NUP188-205ENST00000477069 ROPN1Q9HAT0 212 aaPredicted RBP12.11□□□□□ -0.47
NUP188-205ENST00000477069 CDHR5Q9HBB8 845 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 ANAPC5Q9UJX4 755 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 RRP15Q9Y3B9 282 aaKnown RBP12.11□□□□□ -0.47
NUP188-205ENST00000477069 NME7Q9Y5B8 376 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 DOCK3Q8IZD9 2030 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 TRPM7Q96QT4 1865 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 TRAPPC3O43617 180 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 NPTXRO95502 500 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 TTC4O95801 387 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 LMNB2Q03252 620 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 AUHQ13825 339 aaKnown RBP12.11□□□□□ -0.47
NUP188-205ENST00000477069 CCDC142Q17RM4 750 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 IZUMO3Q5VZ72 239 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 KAZNQ674X7 775 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 LCLAT1Q6UWP7 414 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 ZNF365Q70YC5 407 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 NLRP14Q86W24 1093 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 CCDC25Q86WR0 208 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 EMC1Q8N766 993 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 SLC35B2Q8TB61 432 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 CENPTQ96BT3 561 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 PWWP2AQ96N64 755 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 CNOT10Q9H9A5 744 aaKnown RBP12.11□□□□□ -0.47
NUP188-205ENST00000477069 FLRT1Q9NZU1 646 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
NUP188-205ENST00000477069 ITGAVP06756 1048 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 ZNF865P0CJ78 1059 aaPredicted RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 SEC24CP53992 1094 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 IFI35P80217 286 aaPredicted RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 TRNP1Q6NT89 227 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 SLC27A1Q6PCB7 646 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 MYCBPAPQ8TBZ2 947 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 EIF2AQ9BY44 585 aaKnown RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 NINJ2Q9NZG7 142 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 GJD2Q9UKL4 321 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 SMIM35A0A1B0GVV1 85 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 LRRD1A4D1F6 860 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 KRT7P08729 469 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 VPS41P49754 854 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 ACAP1Q15027 740 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 PCBP1Q15365 356 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP188-205ENST00000477069 GPR162Q16538 588 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 PKDCCQ504Y2 493 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 ODF2Q5BJF6 829 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 ZCCHC9Q8N567 271 aaKnown RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 CCHCR1Q8TD31 782 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 SNTG2Q9NY99 539 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 PCNTO95613 3336 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 HAS3O00219 553 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 NDUFAB1O14561 156 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 DNALI1O14645 258 aaPredicted RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 RASGRF2O14827 1237 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 PPEF2O14830 753 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 RGS16O15492 202 aaPredicted RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 TCEA3O75764 348 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 CELF2O95319 508 aaKnown RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 FAM107AO95990 144 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 IGHA2P01877 340 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 CDC42EP1Q00587 391 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 TMEM62Q0P6H9 643 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 P3H1Q32P28 736 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 PRAMEF19Q5SWL8 479 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 OLFML2BQ68BL8 750 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 C2orf69Q8N8R5 385 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 CMASQ8NFW8 434 aaPredicted RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 HEXIM2Q96MH2 286 aaKnown RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 CCT8L2Q96SF2 557 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 GCOM2Q9BZD3 368 aaPredicted RBP12.1□□□□□ -0.47
NUP188-205ENST00000477069 CNTN3Q9P232 1028 aa12.1□□□□□ -0.47
NUP188-205ENST00000477069 TRIP12Q14669 1992 aaPredicted RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 DYNC1LI2O43237 492 aaPredicted RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 ACSL3O95573 720 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 DARSP14868 501 aaKnown RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 KDELR1P24390 212 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 SMTNL2Q2TAL5 461 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 UBA3Q8TBC4 463 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 USP6NLQ92738 828 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 MRPL45Q9BRJ2 306 aaKnown RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 FOXP3Q9BZS1 431 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 TUBGCP4Q9UGJ1 667 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 TSPAN16Q9UKR8 245 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 ZSCAN5DPP0CG00 497 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 ETS1P14921 441 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 ZNF143P52747 638 aaPredicted RBP12.09□□□□□ -0.47
NUP188-205ENST00000477069 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
NUP188-205ENST00000477069 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms